TCONS_00060570-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060570-protein
Unique NameTCONS_00060570-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length387

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060570-protein ID=TCONS_00060570-protein|Name=TCONS_00060570-protein|organism=Clytia hemisphaerica|type=polypeptide|length=387bp
MGQITETRITPQLTYQVQAFFRAALNMNDTQTVRKLLKHQREAIDIELTN
QEGVLPIHLCAIEGNKPMISILLRAGADINAIDRRGWTCLHAAVHTGNLE
LCQYLLRKGADPLVYSTKQELPVDLSNYSVITYLLVEVMQQKGQIGLARF
HLSRAVAQQKYEVAEQQQEEQKNEVFKTNRRYSQPAVYRQHTSQQSSSIL
KRRPSQISETVSGNDETRCSWSSTVSDESETGSVRSSSSSSSTSSGLSVQ
FPTNTLFLNYVHENEHELLDQLLNEHKVGIINKLDRKGLSSIHWAAMHGF
DECIRVLVKHGANVDIEDPNGWTALHAAVITEKTECVRQLLKCDSRIYAV
TNSGETVFDMTKDQEIKSLLEEHVHSNLKMKLKNSTL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038101XLOC_038101Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060570TCONS_00060570Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..181
NoneNo IPR availablePIRSFPIRSF000654ILKcoord: 133..200
e-value: 13.0
score: 2.1
coord: 177..386
e-value: 1.2E-12
score: 45.2
coord: 10..170
e-value: 1.9E-13
score: 47.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..248
NoneNo IPR availableCDDcd00204ANKcoord: 23..135
e-value: 9.01195E-22
score: 88.2094
NoneNo IPR availableCDDcd00204ANKcoord: 254..370
e-value: 4.99365E-22
score: 88.9798
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 86..101
score: 39.26
coord: 303..317
score: 29.54
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 287..316
e-value: 6.9E-5
score: 32.2
coord: 52..81
e-value: 0.0023
score: 27.2
coord: 85..114
e-value: 1.2E-5
score: 34.8
coord: 320..349
e-value: 0.02
score: 24.0
coord: 15..46
e-value: 1600.0
score: 3.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 52..84
score: 12.743
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 287..319
score: 12.102
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 320..352
score: 8.71
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..117
score: 11.407
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 233..384
e-value: 1.0E-26
score: 93.1
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 14..184
e-value: 1.6E-28
score: 98.8
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 264..346
e-value: 2.6E-12
score: 47.0
coord: 21..112
e-value: 1.8E-13
score: 50.8
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 45..385
score: 23.657
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 22..122
coord: 257..366

Blast
[Close]
BLAST of TCONS_00060570-protein vs. Swiss-Prot (Human)
Match: MYPT2 (Protein phosphatase 1 regulatory subunit 12B OS=Homo sapiens GN=PPP1R12B PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.716e-18
Identity = 45/136 (33.09%), Postives = 74/136 (54.41%), Query Frame = 0 
Query:    8 RITPQLTYQVQAFFRAALNMNDTQTVRKLLKHQREAIDIELTNQEGVLPIHLCAIEGNKPMISILLRAGADINAIDRRGWTCLHAAVHTGNLELCQYLLRKGADPLVYSTKQELPVDLSNYSVITYLLVEVMQQKG 143
            R +P++ ++  A F AA +  DT  VRKLL       DI   N +G+  +H   I+ N  M+  L+   A++N  D  GWT LHAA   G L + +Y +  GA   + +++ E+P DL+    +  LL+E ++++G
Sbjct:   49 RGSPRVRFEDGAVFLAACSSGDTDEVRKLLAR---GADINTVNVDGLTALHQACIDENLDMVKFLVENRANVNQQDNEGWTPLHAAASCGYLNIAEYFINHGASVGIVNSEGEVPSDLAEEPAMKDLLLEQVKKQG 181
The following BLAST results are available for this feature:
BLAST of TCONS_00060570-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MYPT23.716e-1833.09Protein phosphatase 1 regulatory subunit 12B OS=Ho... [more]
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