TCONS_00060530-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060530-protein
Unique NameTCONS_00060530-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length394

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060530-protein ID=TCONS_00060530-protein|Name=TCONS_00060530-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MDNLAYIEDSSTQSDDHQMELLEDFIIGLFVVVFDTKKGNLIEWQIPDEV
DLTGVEFKALVSGSHTVEHDFVYFRHQQYYGLSTFALKTVDSEEERGARM
KSVGIICAKYTSLHEHQEFLESQVQQHLDTPGNYKAMTQYYIKYRHCPLQ
NNAFLGTPRRMNTTDELNVMKISHPIGCFAQFIRFFGENIFALWKFLLLQ
KRILFFAPPPVGIQCYRVYCTGLLGSNVLGLLHSSVNHLLFYVSVCSLAP
LNHLDSYVACTTETIFSTKRGCYDVFVNKQKIECFNSKFKKIKHINSADR
ARYKRLQKYSNEQLCVNEDITDDEKMYTRFFIEQNNRIFRCLTELSKQQD
NRLTTQHIREMGLDPSGDETFLREFIDLYHLNIEYPGASCCGCC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038073XLOC_038073Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060530TCONS_00060530Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018626DUF2347
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018626Protein of unknown function DUF2347PFAMPF09804DUF2347coord: 29..282
e-value: 1.3E-67
score: 228.2

Blast
[Close]
BLAST of TCONS_00060530-protein vs. Swiss-Prot (Human)
Match: LCHN (Protein LCHN OS=Homo sapiens GN=LCHN PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 1.127e-101
Identity = 162/379 (42.74%), Postives = 235/379 (62.01%), Query Frame = 0 
Query:   23 EDFIIGLFVVVFDTKKGNLIEWQIPDEVDLTGVEFKALVSGSHTVEHDFVYFRHQQYYGLSTFALKTVDSEEERGARMKSVGIICAKYTSLHEHQEFLESQVQQHLDTPGNYKAMTQYYIKYRHCPLQNNAFLGTPRRMNTTDEL-----------NVMKISHPIGCFAQFIRFFGENIFALWKFLLLQKRILFFAPPPVGIQCYRVYCTGLLGSNVLGLLHSSV--NHLLFYVSVCSLAPLNHLDSYVACTTETIFSTKRGCYDVFVNKQKIECFNSKFKKIKHINSADRARYKRLQKYSNEQLCVNEDITDD-----EKMYTRFFIEQNNRIFRCLTELSKQQDNRLTTQHIREMGLDPSGDETFLREFIDLYHLNI 383
            ED ++ +FVV FD + GN++EW +P ++DL GVEFK++ SGSH ++ DF+YFR   ++GL+ FA   V+SE ERGARMKSVGI+   YT L+ +  FLE+QV+  L+ PG+Y  +  +Y        +       P R ++   +             MKI+HP GC +QFI+FFGE I  LWKF LL+KRIL F+PPPVG+ CYRVYC   L +  L  +  ++  +   FYV+V  +  L    SYVACTTE IF  KR  YDV+V+ Q ++  +   + +  INSADR +Y+RL +   + L  ++++ +D     E ++  FF+EQNNRIF+ L E+S  QD  LT +H R MGLDP GD +FL + ++ Y +++
Sbjct:   74 EDQVVAVFVVTFDPRSGNMVEWCLPQDIDLEGVEFKSMASGSHKIQSDFIYFRKGPFFGLACFANMPVESELERGARMKSVGILSPSYTLLYRYMHFLENQVRHQLEMPGHYSHLAAFYED------KKGVLHAGPGRGSSLPPVYWLPSIHRYMYPEMKITHPAGCMSQFIKFFGEQILILWKFALLRKRILIFSPPPVGVVCYRVYCCCCLANVSLPGIGGTIPESKPFFYVNVADIESLEVEVSYVACTTEKIFEEKRELYDVYVDNQNVKTHHDHLQPLLKINSADREKYRRLNE-QRQMLLYSQEVEEDYNPCEEDLFVLFFLEQNNRIFQTLLEVSASQDKTLTAEHARGMGLDPQGDRSFLLDLLEAYGIDV 445
The following BLAST results are available for this feature:
BLAST of TCONS_00060530-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LCHN1.127e-10142.74Protein LCHN OS=Homo sapiens GN=LCHN PE=1 SV=1[more]
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