TCONS_00060487-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00060487-protein
Unique NameTCONS_00060487-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length626

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060487-protein ID=TCONS_00060487-protein|Name=TCONS_00060487-protein|organism=Clytia hemisphaerica|type=polypeptide|length=626bp
MVFRLRLGIGARRRERCTLLFVVVIFLVIFVGGIIYLPGGEGADSSGEGG
FVRKIQRIFNSKNPNPIKPPKKHPAVPETDGMHDPPRDHHAEIETQANLE
QKFGHQKDPDLSDEQHQRIKEEIAREKAAFIKEQKQKEIEIENERKQQLL
KITAAPHHQGVETGGEPKDAQAKTRRDFVRKMMKTAWDGYQNHAMGHNEL
KPLAKRGHSAGIFGSSRMGATVVDALDTLYIMGLKDEFKVARDWVAQHLS
FNVNTQVSVFEMNIRFVGGLLSAFALTKDEVFKIKAKELADKLLPAFKTP
TGVPWALVNLNSGYGFNYNWASGGSSILAEFGSLHLEWSYLTQITGENVY
LEKVNKIRKVMHDTPKSDGLYPNYFNPKTGSWGQKHVSLGALGDSFYEYL
IKGWIMSGETDHLAKDMYFDAMRAIDKHLIRKSRGGFTYAGVYNYGSVES
KMEHLACFSGGMFGLGSKHAPSDLQERHMELGKEIARTCRESYRNSATHI
GPESFRFEGPHEAKALRQNEKYYILRPEVVETYFVMWRLTHDQKYRDWAW
DAAQAIEKHCHVGVGFSGIRDVYQVPPSHDDVQQSFFLAETLKYLYLIFS
DDDLMRLDEWVFNTEAHPLPVSGKNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038050XLOC_038050Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060487TCONS_00060487Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001382Glyco_hydro_47
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0004571mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..152
NoneNo IPR availableGENE3D1.50.10.10coord: 158..626
e-value: 8.4E-185
score: 614.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..89
IPR001382Glycoside hydrolase family 47PRINTSPR00747GLYHDRLASE47coord: 219..233
score: 67.62
coord: 585..605
score: 70.07
coord: 256..274
score: 65.66
coord: 390..407
score: 64.02
coord: 524..548
score: 56.76
coord: 182..202
score: 49.43
coord: 295..314
score: 51.67
coord: 451..467
score: 52.94
IPR001382Glycoside hydrolase family 47PFAMPF01532Glyco_hydro_47coord: 182..620
e-value: 3.1E-153
score: 510.8
IPR001382Glycoside hydrolase family 47SUPERFAMILY48225Seven-hairpin glycosidasescoord: 171..621

Blast
[Close]
BLAST of TCONS_00060487-protein vs. Swiss-Prot (Human)
Match: MA1A2 (Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB OS=Homo sapiens GN=MAN1A2 PE=1 SV=1)

HSP 1 Score: 638.647 bits (1646), Expect = 0.000e+0
Identity = 318/610 (52.13%), Postives = 427/610 (70.00%), Query Frame = 0 
Query:   12 RRRERCTLLFVVVIFLVIFVGGIIYLPGGEGADSSGEGGFVRKIQRIFNSKNPNPIKPPKKHPAVPETDGMHDPPRDHHAEIETQANLEQKFGHQKDPDLSDEQHQRIKEEIAREKAAFIKEQKQKEIEIENERKQQLLKITAAPHHQGVETGGEPKDAQAKTRRDFVRKMMKTAWDGYQNHAMGHNELKPLAKRGHSAGIFGSSRMGATVVDALDTLYIMGLKDEFKVARDWVAQHLSFNVNTQVSVFEMNIRFVGGLLSAFALTKDEVFKIKAKELADKLLPAFKTPTGVPWALVNLNSGYGFNYNWASGGSSILAEFGSLHLEWSYLTQITGENVYLEKVNKIRKVMHDTPKSDGLYPNYFNPKTGSWGQKHVSLGALGDSFYEYLIKGWIMSGETDHLAKDMYFDAMRAIDKHLIRKSRGGFTYAGVYNYGSVESKMEHLACFSGGMFGLGSKHAPSDLQERHMELGKEIARTCRESYRNSATHIGPESFRFEGPHEAKALRQNEKYYILRPEVVETYFVMWRLTHDQKYRDWAWDAAQAIEKHCHVGVGFSGIRDVYQVPPSHDDVQQSFFLAETLKYLYLIFSDDDLMRLDEWVFNTEAHPLPV 621
            R  E+  LL ++  F+ +  G   +LP     DSS    F   ++ +       P     K    P    +H P    H E E +   + +  H+K  + + E+ ++ +EEI  E    I+ +K K ++    ++ + L     P+  G+  GG+P+D   + +R+ +++MMK AWD Y+ +  GHNEL+P+A++GHS  IFGSS+MGAT+VDALDTLYIMGL DEF   + W+  +L F+VN++VSVFE+NIRF+GGLL+A+ L+ +E+FKIKA +LA+KLLPAF TPTG+PWA+VNL SG G N+ WAS GSSILAEFG+LH+E+ +L+ +TG+  Y +KV  IRK++    + +GLYPNY NP+TG WGQ H S+G LGDSFYEYL+K W+MS +TDH A+ MY DA+ AI+KHLI+KSRGG T+ G +  G +E KM HLACF+GGMF LG+  + +D    ++ELG EIARTC ESY  +A  +GPESF+F+G  EA A+RQ EKYYILRPEV+ETY+ +WR THD +YR W W+AA AIEK+C V  GFSG++DVY   P+HDDVQQSFFLAETLKYLYL+FS DDL+ LD WVFNTEAHPLPV
Sbjct:   32 RLSEKFILLLILSAFITLCFGAFFFLP-----DSSKHKRFDLGLEDVLI-----PHVDAGKGAKNPGVFLIHGPDEHRHREEEERLRNKIRADHEKALEEAKEKLRKSREEIRAE----IQTEKNKVVQEMKIKENKPLPPVPIPNLVGIR-GGDPEDNDIREKREKIKEMMKHAWDNYRTYGWGHNELRPIARKGHSPNIFGSSQMGATIVDALDTLYIMGLHDEFLDGQRWIEDNLDFSVNSEVSVFEVNIRFIGGLLAAYYLSGEEIFKIKAVQLAEKLLPAFNTPTGIPWAMVNLKSGVGRNWGWASAGSSILAEFGTLHMEFIHLSYLTGDLTYYKKVMHIRKLLQKMDRPNGLYPNYLNPRTGRWGQYHTSVGGLGDSFYEYLLKAWLMSDKTDHEARKMYDDAIEAIEKHLIKKSRGGLTFIGEWKNGHLEKKMGHLACFAGGMFALGADGSRADKAGHYLELGAEIARTCHESYDRTALKLGPESFKFDGAVEAVAVRQAEKYYILRPEVIETYWYLWRFTHDPRYRQWGWEAALAIEKYCRVNGGFSGVKDVYSSTPTHDDVQQSFFLAETLKYLYLLFSGDDLLPLDHWVFNTEAHPLPV 626
The following BLAST results are available for this feature:
BLAST of TCONS_00060487-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MA1A20.000e+052.13Mannosyl-oligosaccharide 1,2-alpha-mannosidase IB ... [more]
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