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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00060280-protein ID=TCONS_00060280-protein|Name=TCONS_00060280-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1172bp
MKMALSIAFFITACYQLACGAKTANYACPETTSDDDSVVIFGYVVEHDNV
TGTIRFQTLEVLKGGNWSDIDQSEIEGRLSESFTSKCHTPRMDEALVVHL
NDEKVIKRIAFPSSSQVSRTTRVRRNIFGLVPINRKCTKRCSFGGSCAFH
PLTGRQYCSCTHIYCSKEYGPVCGNDQFTYPNECTMQHNSCFKQRRITVA
YRGRCDVRNCKDLKKKGYAKTDGHYFLHPTPKCDKAIKVYCYDMDSPEPK
DFITLPSGPEHNMAYIYEKRMDLSKKFECEGPVGPIVYSKSGRTHFSKVR
INLATMTIIQDDYTFATSDRQGSPVPFATGGDCFSAKQDAKCRKGSFKLD
ISNTGFKISSKVRWTLESDTNSLKIQDYRNSEGLVVSAKCGGWCGHCVPQ
PKLQVELQSCNIKTDSCSGVQCPYYGQCSAKGETYKCSCPNKCTREVDPV
CGSDGVTYSNRCSMRYQSCVAKKFIDVKHQGSCGSQDCSETLKCLFNSKC
QTQNGVSRCKCSTVCSNDIEFVCGSNLKTYQNECFLKMDSCKNQRSISVK
YLGVCRYSHSQIFDFDIAFAIGGKSIDRQVLLQQQKQLMSYFLDSFRFPI
EQNGIRLAFLTYDDSVKIVKNLDQNFVLPYVRRYLDEMTLGGDSSKIERS
LQGATSSIFTRARPGVQKILVVFADDSSDSDLNAIRQAKERLADQGVQVI
LISSGNRMSMSIAAAIASSGDNLITGLTSKNFLQSYQQFIDIVINGRCSF
LKCQSPETCQSLDMTNIKCGCNVNCQNALQPVCSSTGVSYGNLCLMKQDA
CVNKKNIFKINDGFCKINKPMDVLVTFDTSNQMTSQDYDRVKTFLRNVGK
SYDVGKDKARIGLINFGSRQKVVLDLNEGISEKRIEDAVQKVTNIGGNRD
IPRAIRFSINHFSQYRRDSVPKEFIFITSKTDVANSGVLERLFTSFSQNN
IKLKFGILGKPTTRFVDFLTKGRSSDQLVSIDDDDESIFKFFKLLKPTVT
VEDKMDVGFILTGDKNTFPKQRDSVVEIIRRLRMQPGSPDMSNKVGFIDQ
ERFFPLTTDKSYIIRNLQNSKPISDPDLKNQFERSVQFFTQQNGGRSSVP
KVLFAFVDDLILNYDANSIASSLKRLLDQGVKVVLLQSESSYSLQVLPTF
IKDRLDRVDINIDDLSDILEKI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0004222 | metalloendopeptidase activity |
| GO:0008270 | zinc ion binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004222 |
metalloendopeptidase activity |
| molecular_function |
GO:0005515 |
protein binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002035 | von Willebrand factor, type A | SMART | SM00327 | VWA_4 | coord: 820..996
e-value: 7.0E-10
score: 48.8
coord: 564..742
e-value: 1.4E-8
score: 44.5 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 991..1168
e-value: 0.17
score: 11.2 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 816..990
e-value: 1.7E-16
score: 60.3 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 564..751
e-value: 2.1E-12
score: 46.7 |
| IPR002035 | von Willebrand factor, type A | PFAM | PF00092 | VWA | coord: 567..728
e-value: 1.7E-12
score: 47.8
coord: 822..942
e-value: 3.1E-14
score: 53.5 |
| IPR002035 | von Willebrand factor, type A | PROSITE | PS50234 | VWFA | coord: 822..995
score: 15.008 |
| IPR002035 | von Willebrand factor, type A | PROSITE | PS50234 | VWFA | coord: 566..743
score: 14.215 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 565..746 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 817..953 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 1004..1168 |
| IPR002350 | Kazal domain | SMART | SM00280 | kazal_3 | coord: 770..815
e-value: 6.2E-6
score: 35.7
coord: 438..483
e-value: 2.6E-17
score: 73.5
coord: 510..555
e-value: 2.1E-12
score: 57.2
coord: 159..205
e-value: 7.0E-12
score: 55.5 |
| IPR002350 | Kazal domain | PFAM | PF07648 | Kazal_2 | coord: 438..483
e-value: 2.4E-11
score: 43.5
coord: 508..555
e-value: 3.5E-7
score: 30.2
coord: 164..205
e-value: 8.6E-8
score: 32.1
coord: 771..815
e-value: 7.0E-4
score: 19.6 |
| IPR002350 | Kazal domain | PROSITE | PS51465 | KAZAL_2 | coord: 159..207
score: 11.503 |
| IPR002350 | Kazal domain | PROSITE | PS51465 | KAZAL_2 | coord: 770..817
score: 9.438 |
| IPR002350 | Kazal domain | PROSITE | PS51465 | KAZAL_2 | coord: 431..485
score: 12.662 |
| IPR002350 | Kazal domain | PROSITE | PS51465 | KAZAL_2 | coord: 510..557
score: 10.974 |
| IPR002350 | Kazal domain | SUPERFAMILY | 100895 | Kazal-type serine protease inhibitors | coord: 492..555 |
| IPR002350 | Kazal domain | SUPERFAMILY | 100895 | Kazal-type serine protease inhibitors | coord: 153..205 |
| IPR002350 | Kazal domain | SUPERFAMILY | 100895 | Kazal-type serine protease inhibitors | coord: 764..815 |
| IPR002350 | Kazal domain | SUPERFAMILY | 100895 | Kazal-type serine protease inhibitors | coord: 417..483 |
| IPR012314 | Peptidase M12B, GON-ADAMTSs | PFAM | PF08685 | GON | coord: 208..407
e-value: 4.3E-51
score: 173.5 |
| IPR012314 | Peptidase M12B, GON-ADAMTSs | PROSITE | PS51046 | GON | coord: 206..410
score: 43.592 |
| None | No IPR available | GENE3D | 3.30.60.30 | | coord: 495..562
e-value: 1.2E-14
score: 53.7
coord: 423..492
e-value: 2.5E-18
score: 65.5 |
| None | No IPR available | GENE3D | 3.30.60.30 | | coord: 152..205
e-value: 1.1E-13
score: 50.6 |
| None | No IPR available | GENE3D | 3.30.60.30 | | coord: 752..815
e-value: 1.3E-10
score: 41.2 |
| None | No IPR available | CDD | cd01450 | vWFA_subfamily_ECM | coord: 592..721
e-value: 2.36149E-10
score: 58.8422 |
| None | No IPR available | CDD | cd00104 | KAZAL_FS | coord: 443..483
e-value: 1.64849E-12
score: 63.0578 |
| None | No IPR available | CDD | cd00104 | KAZAL_FS | coord: 165..205
e-value: 5.60003E-11
score: 58.8206 |
| None | No IPR available | CDD | cd00104 | KAZAL_FS | coord: 515..555
e-value: 2.30316E-9
score: 53.813 |
| None | No IPR available | CDD | cd00104 | KAZAL_FS | coord: 775..815
e-value: 1.25354E-6
score: 46.109 |
| None | No IPR available | CDD | cd00198 | vWFA | coord: 822..991
e-value: 6.18173E-18
score: 81.8434 |
Blast
BLAST of TCONS_00060280-protein vs. Swiss-Prot (Human)
Match: ATS9 (A disintegrin and metalloproteinase with thrombospondin motifs 9 OS=Homo sapiens GN=ADAMTS9 PE=1 SV=4) HSP 1 Score: 121.709 bits (304), Expect = 1.117e-27 Identity = 71/209 (33.97%), Postives = 114/209 (54.55%), Query Frame = 0
Query: 208 RNCKDLKKKGYAKTDGHYFLHPTPKCDKAIKVYCYDMDSPEPKDFITLPSGPEHNMAYIYEKRM--------DLSKKFECEGPVGPIVYSKSGRTHFSKVRINLATMTIIQDDYTFATSDRQGSPVPFATGGDCFSAKQDAKCRKGSFKLDISNTGFKISSKVRWTLESDTNSLKIQDYRNSEGLVVSAKCGGWCGHCVPQPKLQVELQ 408
+NCK++K+ A DG YFL K +K++C M S PK+++TL G N + +Y R+ + S++ +C+ Y+ +G + F K+RI+L +M II D FA + +G PVPFAT GDC+SA AKC +G F +++ TG ++ RW + + I+ ++ +G V KCGG+CG C P +E++
Sbjct: 1737 QNCKEVKRLKGASEDGEYFLMIR---GKLLKIFCAGMHSDHPKEYVTLVHGDSENFSEVYGHRLHNPTECPYNGSRRDDCQCRKD---YTAAGFSSFQKIRIDLTSMQIITTDLQFARTS-EGHPVPFATAGDCYSA---AKCPQGRFSINLYGTGLSLTESARWISQGNYAVSDIK--KSPDGTRVVGKCGGYCGKCTPSSGTGLEVR 1933
The following BLAST results are available for this feature:
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