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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00059998-protein ID=TCONS_00059998-protein|Name=TCONS_00059998-protein|organism=Clytia hemisphaerica|type=polypeptide|length=727bp
MADLAKLKKSRNAYRLNASKLFAKFDNPNFDTLTETQRYDVMDELNSNII
TIQSKHDTIKKLDEKILELLSDDEEMADELNANTEFELKVQKYVSKLKRL
ERKLEAPYANVNVTPIATGTIAATVQQPIIERKNDGVRLPKIEIPKFKGD
PLEWNSFRDTFTATIHENSKLSDIEKFTYLQSYVRDEAQQAIQGLPLSGE
NYDKAWQLLTERYGNSQLIRSSLMNKLIKLEKPSNGSAKELRKLYDTVES
NVRALKSTGIEKETLGPMLIPIVLEKLPNVVRLHLSRTLGSNTWDITEFL
KAINEEILARENFDYLKGPEAENSNSKKRSSMNFGGAQQRKKFCRFCQST
DHYSDQCTIVTTNSARREILKKNHCCFNCLKPGHSKKECKTTIKCYKCGT
SGNHPTALCQQTNTKGEKTDEKSEEKNDETLSLTELQTAVIIEKSQNLVD
DSGTVLLQTANGIAESDNKARGVRVLFDSGAQQTYITEKVVKDLNLSPIR
KVNMCVKTFGSSKEKISSVKEYELSLKGDSTVKIKAFAVPTICAPVSGQD
IGTVLEKFPHLKQYTLAENDKTVEKSIDVLIGGDYYWELMTGDVKKDKSG
LTLLKSLFGYVLSGPMKFPESSTNVVSTHVMKIVCETREDKLLSEEVKNF
WDLETIGIKENERSVYDKFNDEIDFAEGRFIVKLPFKDSQSSLPDHYSLS
KKRLDSLHNRIGKNPELFEQYSAVFDD Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 238..258 |
| None | No IPR available | COILS | Coil | Coil | coord: 83..103 |
| None | No IPR available | CDD | cd00303 | retropepsin_like | coord: 473..546
e-value: 1.708E-5
score: 42.7088 |
| IPR001878 | Zinc finger, CCHC-type | SMART | SM00343 | c2hcfinal6 | coord: 343..359
e-value: 0.56
score: 12.8
coord: 375..391
e-value: 0.017
score: 22.0
coord: 394..411
e-value: 45.0
score: 1.0 |
| IPR001878 | Zinc finger, CCHC-type | GENE3D | 4.10.60.10 | | coord: 363..415
e-value: 3.9E-5
score: 22.9 |
| IPR001878 | Zinc finger, CCHC-type | GENE3D | 4.10.60.10 | | coord: 163..362
e-value: 0.067
score: 12.7 |
| IPR001878 | Zinc finger, CCHC-type | PROSITE | PS50158 | ZF_CCHC | coord: 376..390
score: 9.175 |
| IPR021109 | Aspartic peptidase domain | GENE3D | 2.40.70.10 | | coord: 455..585
e-value: 1.4E-8
score: 34.4 |
| IPR005312 | Protein of unknown function DUF1759 | PFAM | PF03564 | DUF1759 | coord: 147..284
e-value: 4.9E-41
score: 140.0 |
| IPR008737 | Peptidase aspartic, putative | PFAM | PF05585 | DUF1758 | coord: 472..614
e-value: 6.9E-18
score: 64.9 |
Blast
The following BLAST results are available for this feature:
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