TCONS_00059830-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059830-protein
Unique NameTCONS_00059830-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length225

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059830-protein ID=TCONS_00059830-protein|Name=TCONS_00059830-protein|organism=Clytia hemisphaerica|type=polypeptide|length=225bp
MADLSPVESARAKGKSVIKPIVFGNESKYFGKKRETDGHTHTWSVYVKPF
DEKEDMSTYIKKVQFKLHESYSDALRTVTKPPYEVTETGWGEFEIIIKIY
FVDAAERPVTLYHLLKLFSNPLLANQPIVGTQGQLVSEYYDEIIFQDPSV
FLYKQLTAGKTLPCKKNETDWRAKETKTLISMKHAKKRVGEEISQMNERL
KKQKNAIQKIKEEITKIEKQQEAKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037633XLOC_037633Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059830TCONS_00059830Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005033YEATS
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 186..223
NoneNo IPR availableGENE3D3.40.50.150coord: 19..222
e-value: 0.001
score: 17.9
IPR005033YEATSPFAMPF03366YEATScoord: 40..119
e-value: 1.1E-33
score: 115.0
IPR005033YEATSPROSITEPS51037YEATScoord: 18..125
score: 23.106

Blast
[Close]
BLAST of TCONS_00059830-protein vs. Swiss-Prot (Human)
Match: YETS4 (YEATS domain-containing protein 4 OS=Homo sapiens GN=YEATS4 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 4.473e-74
Identity = 123/229 (53.71%), Postives = 162/229 (70.74%), Query Frame = 0 
Query:    1 MADLSPVESARAKGKSVIKPIVFGNESKYFGKKRETDGHTHTWSVYVKPFDEKEDMSTYIKKVQFKLHESYSDALRTVTKPPYEVTETGWGEFEIIIKIYFVDAAERPVTLYHLLKLF---SNPLLANQPIVGTQGQLVSEYYDEIIFQDPSVFLYKQLTAGK--TLPCKKNETDWRAKETKTLISMKHAKKRVGEEISQMNERLKKQKNAIQKIKEEITKIEKQQEAK 224
            MA+  P    R KG +++KPIV+GN ++YFGKKRE DGHTH W+VYVKP+   EDMS Y+KK+QFKLHESY + LR VTKPPYE+TETGWGEFEIIIKI+F+D  ERPVTLYHLLKLF   +N +L  + +       VSE+YDE+IFQDP+  + + LT  +  TL   K+ET++   E KT   ++ AKK+   EI+++ ERLK  +  I  +K EI K+E+  +AK
Sbjct:    5 MAEFGPDSGGRVKGVTIVKPIVYGNVARYFGKKREEDGHTHQWTVYVKPY-RNEDMSAYVKKIQFKLHESYGNPLRVVTKPPYEITETGWGEFEIIIKIFFIDPNERPVTLYHLLKLFQSDTNAMLGKKTV-------VSEFYDEMIFQDPTAMMQQLLTTSRQLTLGAYKHETEFAELEVKTREKLEAAKKKTSFEIAELKERLKASRETINCLKNEIRKLEEDDQAK 225
The following BLAST results are available for this feature:
BLAST of TCONS_00059830-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
YETS44.473e-7453.71YEATS domain-containing protein 4 OS=Homo sapiens ... [more]
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