TCONS_00059806-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00059806-protein
Unique Name	TCONS_00059806-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	350

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00059806-protein ID=TCONS_00059806-protein|Name=TCONS_00059806-protein|organism=Clytia hemisphaerica|type=polypeptide|length=350bp
MVIESQKISSTMGSMKKNQCSSIMERHQNDEVTFEGILEAAERTKDIIHN
TPTMTCSYFDHLIGDDKKLFFKCEIFQKTGAFKIRGSANAVRRIIEERGK
KFKVVTHSCGNGAFGLAYSAMVNGIPSTVVIPNNQSKKESAQGYKAKVIQ
CEESPKMRKEMVRRVISEDPINTEYIPTSDHPFCIEGVGSIGLEMLAQNP
ELDAILVACCFGSLISGIAKACKSVKPDIKIFAVEPERANDIAMSFEKGE
RVELTETPDTICDALKYSVGVQTWPIINEYVEPDVLLVSEEEIKKAMFMI
FQRMKLVVEPSAAVVLAAALSDQFRGLSKGLKNIGLVLCGGNADLENLPW

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_037625	XLOC_037625	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00059806	TCONS_00059806	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001926	TrpB-like_PLP-dep

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1100		coord: 130..349 e-value: 2.3E-37 score: 127.9
None	No IPR available	GENE3D	3.40.50.1100		coord: 21..129 e-value: 8.0E-13 score: 47.6
None	No IPR available	CDD	cd01562	Thr-dehyd	coord: 34..344 e-value: 7.69914E-93 score: 280.913
IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme	PFAM	PF00291	PALP	coord: 47..340 e-value: 7.2E-57 score: 192.9
IPR001926	Tryptophan synthase beta subunit-like PLP-dependent enzyme	SUPERFAMILY	53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	coord: 33..346

Blast

[Close]

BLAST of TCONS_00059806-protein vs. Swiss-Prot (Human)
Match: SRR (Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 9.098e-79
Identity = 137/327 (41.90%), Postives = 203/327 (62.08%), Query Frame = 0

Query:   32 VTFEGILEAAERTKDIIHNTPTMTCSYFDHLIGDDKKLFFKCEIFQKTGAFKIRGSANAVRRIIE---ERGKKFKVVTHSCGNGAFGLAYSAMVNGIPSTVVIPNNQS--KKESAQGYKAKVIQCEESPKMRKEMVRRVISEDPINTE--YIPTSDHPFCIEGVGSIGLEMLAQNPELDAILVACCFGSLISGIAKACKSVKPDIKIFAVEPERANDIAMSFEKGERVELTETPDTICDALKYSVGVQTWPIINEYVEPDVLLVSEEEIKKAMFMIFQRMKLVVEPSAAVVLAAALSDQFRGLSKGLKNIGLVLCGGNADL-ENLPW 350
            ++F  + +A    +D IH TP +T S  + L G  + LFFKCE+FQKTG+FKIRG+ NAVR ++    ER  K  VVTHS GN    L Y+A + GIP+ +V+P      KK + Q Y A ++ CE S + R+ + +RV  E    TE   +  +  P  I G G+I LE+L Q P +DA++V    G +++GIA   K++KP +K++A EP  A+D   S  KG+ +     P+TI D +K S+G+ TWPII + V+ D+  V+E+EIK A  ++++RMKL++EP+A V +AA LS  F+ +S  +KNI +VL GGN DL  ++ W
Sbjct:    7 ISFADVEKAHINIRDSIHLTPVLTSSILNQLTG--RNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPK-AVVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENVAKRVTEE----TEGIMVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSNADDCYQSKLKGKLMPNLYPPETIADGVKSSIGLNTWPIIRDLVD-DIFTVTEDEIKCATQLVWERMKLLIEPTAGVGVAAVLSQHFQTVSPEVKNICIVLSGGNVDLTSSITW 325

The following BLAST results are available for this feature:

BLAST of TCONS_00059806-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00059806-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
SRR	9.098e-79	41.90	Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1	[more]

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TCONS_00059806-protein (polypeptide) - C. hemisphaerica