AP4 (polypeptide) - C. hemisphaerica

Overview
NameAP4
Unique NameTCONS_00059722-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length297

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059722-protein ID=TCONS_00059722-protein|Name=AP4|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MDESEERKIKRAAANVNERRRMQNINCGFEALRVILNVENSSKLSKSAIL
RHAVEMLRNLMSENQQLRDQNQFMRNLYCNNNYNSQTMPPFLQTPTSTRN
HKKSESSEESPRKRLRLNKTDITENTDQNQTTPTVRFKLPETSESPAKSP
KSPRKYSANINKLLASPKRITRSSVIQQNLAYTSPTQPISPHKLQQTPIS
SILESPSRRSLRLMEKDQQQLYPSPSQPLETPPAIRFTDSFSHQPFFYPS
SSAKSKLDFEDYRNLILTPESMKMMPPRSAKRSLDAIIHAIDQIEKS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037567XLOC_037567Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059722TCONS_00059722Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 50..77
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..157
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 15..66
e-value: 2.1E-11
score: 53.9
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 10..60
e-value: 2.5E-13
score: 49.7
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 3..74
e-value: 2.8E-15
score: 55.5
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 9..60
score: 13.395
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 10..65
e-value: 1.02714E-11
score: 57.9943
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 5..75

Blast
The following BLAST results are available for this feature:
BLAST of AP4 vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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