TCONS_00059718-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00059718-protein
Unique NameTCONS_00059718-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length545

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00059718-protein ID=TCONS_00059718-protein|Name=TCONS_00059718-protein|organism=Clytia hemisphaerica|type=polypeptide|length=545bp
MLVLFETPAGYAVFKLLNEKKLAEVDNLYKDFETGDKASQVVKLKHFKKF
EDTTEALAAATASVEGKMSKSLKKLMKKVASKEVTEEMAVADAKIGNIIK
EKFDISCVCSSAIHELMRGIRSQMNSLITGLSEKETTAMSLGLAHSLSRY
KLKFSPDKVDTMIVQAISLLDDLDKELNNYVMRCREWYGWHFPEMGKIVT
DNLAYAKTVKLIGFKTNTADSDLSSILPEEVEEEVKAAAEISMGTDISEE
DIENVTYLCEQIIQIAEYRMSLYDYLKNRMQAIAPNLTVMVGELVGARLI
AHAGSLLNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLVGQ
TSAKTKGKISRMLAAKTALAIRYDALGEEIDTEMGIQNRAKLETRIRFLE
EGGMTKISGTGNGKVHNAKKHSIKSEDNIPVYDNGMDSTLGKKRKVKEES
DSDAEDTKPVIKKKKVKKEPVDSDEEMEEKPKKKKKVKKEEPEEEEEETE
PVEKKKKKKKKAAEPEPEEEEEEVVEKKDKKKKKKKKKTEESDSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_037564XLOC_037564Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00059718TCONS_00059718Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012976NOSIC
IPR002687Nop_dom
IPR015943WD40/YVTN_repeat-like_dom
IPR012974NOP5_N
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 518..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 404..545
IPR012976NOSICSMARTSM00931NOSIC_2coord: 162..214
e-value: 5.7E-33
score: 125.5
IPR002687Nop domainPFAMPF01798Nopcoord: 169..397
e-value: 2.9E-85
score: 285.3
IPR002687Nop domainPROSITEPS51358NOPcoord: 283..401
score: 37.455
IPR002687Nop domainSUPERFAMILY89124Nop domaincoord: 156..401
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 67..545
e-value: 2.2E-4
score: 19.3
IPR012974NOP5, N-terminalPFAMPF08156NOP5NTcoord: 2..66
e-value: 1.2E-20
score: 73.5

Blast
[Close]
BLAST of TCONS_00059718-protein vs. Swiss-Prot (Human)
Match: NOP58 (Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1 SV=1)

HSP 1 Score: 601.668 bits (1550), Expect = 0.000e+0
Identity = 346/552 (62.68%), Postives = 417/552 (75.54%), Query Frame = 0 
Query:    1 MLVLFETPAGYAVFKLLNEKKLAEVDNLYKDFETGDKASQVVKLKHFKKFEDTTEALAAATASVEGKMSKSLKKLMKKVASKEVTEEMAVADAKIGNIIKEKFDISCVCSSAIHELMRGIRSQMNSLITGLSEKETTAMSLGLAHSLSRYKLKFSPDKVDTMIVQAISLLDDLDKELNNYVMRCREWYGWHFPEMGKIVTDNLAYAKTVKLIGFKTNTADSDLSSILPEEVEEEVKAAAEISMGTDISEEDIENVTYLCEQIIQIAEYRMSLYDYLKNRMQAIAPNLTVMVGELVGARLIAHAGSLLNLAKQPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLVGQTSAKTKGKISRMLAAKTALAIRYDALGEEIDTEMGIQNRAKLETRIRFLEEGGMTKISGTGNGKVHNAKKHSIKSEDNIPVYDNGMDSTLGKKRKVKEESDSDAEDTKPVIKKKKVKKEPVDSDEEMEEKPKKKKKVKKEEPEEEEEE------TEPVEKKKKKKKKAAEPEPEEEEEEVVEK---KDKKKKKKKKKTEESD 543
            MLVLFET  GYA+FK+LNEKKL EVD+L+K+FET +KA+++VKLKHF+KF+DT EALAA TA +EGK++K LKK + K   KE  E +AVADAK+G +IKEK ++SC+ S  ++ELMRGIRSQM+ LI G+  +E  AM LGLAHSLSRY+LKFS DKVDTMIVQAISLLDDLDKELNNY+MRCREWYGWHFPE+GKI++DNL Y K ++ +G + N A + LS +LPEEVE EVKAAAEISMGT++SEEDI N+ +LC Q+I+I+EYR  LY+YL+NRM AIAPN+TVMVGELVGARLIAHAGSLLNLAK  ASTVQILGAEKALFRALK++ DTPKYGLIYHASLVGQTS K KGKISRMLAAKT LAIRYDA GE+  + MG++NRAKLE R+R LE+ G+ KISGTG   +   +K+  KSE  +  YD   DSTL                  P   KK+ K E VD ++E+ EK  KK K+K +  EEEEE+      T   +KKK+ KKK  + EP  EEE          +KKKKKKKK E  D
Sbjct:    1 MLVLFETSVGYAIFKVLNEKKLQEVDSLWKEFETPEKANKIVKLKHFEKFQDTAEALAAFTALMEGKINKQLKK-VLKKIVKEAHEPLAVADAKLGGVIKEKLNLSCIHSPVVNELMRGIRSQMDGLIPGVEPREMAAMCLGLAHSLSRYRLKFSADKVDTMIVQAISLLDDLDKELNNYIMRCREWYGWHFPELGKIISDNLTYCKCLQKVGDRKNYASAKLSELLPEEVEAEVKAAAEISMGTEVSEEDICNILHLCTQVIEISEYRTQLYEYLQNRMMAIAPNVTVMVGELVGARLIAHAGSLLNLAKHAASTVQILGAEKALFRALKSRRDTPKYGLIYHASLVGQTSPKHKGKISRMLAAKTVLAIRYDAFGEDSSSAMGVENRAKLEARLRTLEDRGIRKISGTGKA-LAKTEKYEHKSE--VKTYDPSGDSTL------------------PTCSKKR-KIEQVDKEDEITEKKAKKAKIKVKVEEEEEEKVAEEEETSVKKKKKRGKKKHIKEEPLSEEEPCTSTAIASPEKKKKKKKKRENED 529
The following BLAST results are available for this feature:
BLAST of TCONS_00059718-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NOP580.000e+062.68Nucleolar protein 58 OS=Homo sapiens GN=NOP58 PE=1... [more]
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