TCONS_00058282-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058282-protein
Unique NameTCONS_00058282-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length751

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058282-protein ID=TCONS_00058282-protein|Name=TCONS_00058282-protein|organism=Clytia hemisphaerica|type=polypeptide|length=751bp
IRSTMIIKERRFRKRKDIQALQYRQGPSSLDDEKSFFGHSKKQDDSPKGL
DELVPHTPHKVDLITELAGSEVLIVYFAKLGASHQDSMIDLDYLETLIES
GAKVNYTDRYGQTVLHEIVLRWPLDVAEFMLQHGADLNMGDDFGRTPLHV
AASVNSAEYINWLVSNGADVHARTLKEEQTPIHYASKYNSCDSITALIDL
GAKLNDRDHKQRTPLQVGAETGREEACRLLMEYDAPAGVYDDTGTTCLAH
MIEKMPDVAAEALEQFQKVDKASRTVRYYLSYLETEKWNMLRAKKNPTGG
WRELTKREPLEAIIKHNESRLIMHPVIQRLLAKKSELYGRRYFLSNLLIN
FVFTLIWTALTIGLPGPEKVENTSKKLSFYRPVSENMWRIILEIIGLLMV
IYFVLKIRIEASLLSKNFNSYKLSRSQEIKRDLPYCHPRWPQEGKFINGE
LKKITSTPLASIYDIWYYMDCLSFLGLVILVISRAIIVEADFATEKDLYF
RTLSFHYHAYPFVLILIWLRFMQAFRPFITLGPFIAMLGYVASDTMKFAF
LFCEFYVPYCCAIWIVFGNVPGNSFEHFNDLLFEVLRMTVVDSFDFDALT
SQNKLVAQLICGTYLALTSITCLNLYIALLSETFSRVFGNATATAYMLQG
EALISVEKKMNQSKRKAIQLFIAEQCSPETVYGVGGETSDEARDIMSEMD
NLKRQCDAIKKLQQDMKSRATFFKIEAMGILSQQNEIMEDLEETVQAMTT
E
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036714XLOC_036714Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058282TCONS_00058282Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR013122PKD1_2_channel
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 731..751
NoneNo IPR availableCOILSCoilCoilcoord: 692..719
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..52
NoneNo IPR availableCDDcd00204ANKcoord: 105..231
e-value: 4.2936E-30
score: 115.173
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 110..139
e-value: 1.9
score: 17.5
coord: 210..241
e-value: 130.0
score: 11.4
coord: 68..106
e-value: 1400.0
score: 3.9
coord: 177..206
e-value: 0.083
score: 22.0
coord: 143..172
e-value: 1.5E-4
score: 31.1
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 143..175
score: 12.529
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 177..209
score: 10.686
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 110..142
score: 10.499
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 87..182
e-value: 1.7E-27
score: 95.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 148..235
e-value: 1.4E-11
score: 44.7
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 183..277
e-value: 9.4E-17
score: 60.5
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 90..248
score: 42.441
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 91..251
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 503..636
e-value: 8.3E-10
score: 37.8

Blast
[Close]
BLAST of TCONS_00058282-protein vs. Swiss-Prot (Human)
Match: PSD10 (26S proteasome non-ATPase regulatory subunit 10 OS=Homo sapiens GN=PSMD10 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.548e-16
Identity = 48/154 (31.17%), Postives = 77/154 (50.00%), Query Frame = 0 
Query:   95 ETLIESGAKVNYTDRYGQTVLHEIVLRWPLDVAEFMLQHGADLNMGDDFGRTPLHVAASVNSAEYINWLVSNGADVHARTLKEEQTPIHYASKYNSCDSITALIDLGAKLNDRDHKQRTPLQVGAETGREEACRLLMEYDAPAGVYDDTGTTCL 248
            E+++   +    TD+  +T LH        ++ EF+LQ G  +N  DD G +PLH+AAS    E +  L+  GA V+A   +   TP+HYA+  N  +    L++ GA  + +DH + T +   A  G  +   +L+ Y A   + D  G T L
Sbjct:   24 ESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN-QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPL 176
The following BLAST results are available for this feature:
BLAST of TCONS_00058282-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PSD104.548e-1631.1726S proteasome non-ATPase regulatory subunit 10 OS... [more]
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