TCONS_00056425-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056425-protein
Unique NameTCONS_00056425-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length232

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056425-protein ID=TCONS_00056425-protein|Name=TCONS_00056425-protein|organism=Clytia hemisphaerica|type=polypeptide|length=232bp
MASAGALLLKQKVPFVMELDAEVNGIRFAVRGKGTGDATTGTIEAKFVCT
TGELPVPWASILSTMSYGAFCFAKYPDNIKDFFKSALPDGYIQERTISFE
NDGAYKVRGVITYEHGSIYNRVTLKGQGFKKDGHILQKQYEFCCPNNAVY
VLPDKENNGLRVVYNKTYKLKDGGHHLAAHEQKNIPLGGGVVDIPNYHHL
HAGNIFSKDPEETRDHLCLVETIRAVDLETYN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035557XLOC_035557Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056425TCONS_00056425Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000786Green_fluorescent_prot
IPR011584GFP-related
IPR009017GFP
Vocabulary: Biological Process
TermDefinition
GO:0006091generation of precursor metabolites and energy
GO:0008218bioluminescence
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008218 bioluminescence
biological_process GO:0006091 generation of precursor metabolites and energy
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000786Green fluorescent protein, GFPPRINTSPR01229GFLUORESCENTcoord: 129..148
score: 35.0
coord: 149..170
score: 31.82
coord: 50..70
score: 55.24
coord: 108..128
score: 33.33
coord: 29..49
score: 52.38
coord: 213..232
score: 25.0
coord: 71..86
score: 38.75
coord: 172..191
score: 50.0
coord: 4..28
score: 44.0
coord: 192..210
score: 42.11
NoneNo IPR availableGENE3D2.40.155.10coord: 7..228
e-value: 7.3E-61
score: 205.1
IPR011584Green fluorescent protein-relatedPFAMPF01353GFPcoord: 8..223
e-value: 4.6E-50
score: 170.0
IPR009017Green fluorescent proteinSUPERFAMILY54511GFP-likecoord: 4..227

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056425-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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