TCONS_00056412-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00056412-protein
Unique NameTCONS_00056412-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1697

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00056412-protein ID=TCONS_00056412-protein|Name=TCONS_00056412-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1697bp
MKGHTILITEKRFKPEKITLYEGEVITFQLEDVTSEIGHHEVYQVYRDRD
SCLRVDGGFASEQPIVSKGTWSQELNLARKYLFKCGDLPLLEVVVNRKPV
HVVKVTDEGFNGAVVRLFKGDTVRWTWKNCEEKHNIIERRYCLEHGGYQD
YDSRQEAQYSGTYFQTFNVPGIYFFKTQSRNEERAFCVVQVVEKFREHLL
DVRDIGFTHALFEINTGDRVWVHWRQSQTNSTTSHSILIKRVCQIDDSNT
EKLVIAEDSYPARPAGLFSHLFNDAGIYEILDGERPHLKCVIIVKPIAKQ
HVVKITNNEFSPALGSVTQGDRIWWTWNGNDLSDDFRLLQVVNEPTSPKG
CCQSPEKMFHKILRTVGVFSATLNDFGLETFTSSTLREGNEKQLYCCLVA
QPSSTHHEVKLKKNGFFPQSVXCLVAQPSSTHHEVKLKKNGFFPQSVQAK
KGDIVWWKWTGTTNELSGLEQINVSGEHEDSVFDCPIQENTGAYVMRFEQ
TGTFNFRSIGVLGEPHFMAVIAEEKEQVLKVQVSPKGVRPDPVVARTGDI
ICWMWPKHILSSISEAGLAIKDDDDVFFSNRRCHSQQFLTPGVYHYTCVS
LTPHDRNSEFAPDDVWSTVLVDTAITDTIVKNVDPAFYRLDHIHIVKDSD
ILFTYNKPSVDVWQWSVVCLDDSSLVDIENLFIPNTGRVFSFKQVGTFQV
NVVNAKSGKYECVVNVASTEQEAPTPTLVATSKNGGNVREGHTIFLDDQS
TDKNVEMYYTTDGSNPIIGEPSTKLYAPQSGIKLNKTGLSFIRAIAKMKG
MLPSKPLTSKRFCVMPPDYASTTDVSGDEAPKTKEHLALQKAKEAAVDIE
KQRYRLSTVEEVNDSREERSRASNRDGEQPSRPSTVERVQLQKSRASTAE
RGRPSTIENKTPIYSKVSKPSTAESKPPTRGKNESPVKSRPSTVEGRPKS
RPSTMESDIPYVIIKDGTMEKRGKIVSITGTKFVPEYLTLYAGESLTFQL
QPDGESLIENKVEQVFVSGQNSYPVTGGFDSGDKIQTTQKWTQEFNCPNE
YSFSFADHPIFRVVVKPKPVVDAVVTDNGFTKSLIRVYKGDNIRWTWSNC
ITQHSIERVEYCLKHAGYVPVYTTEKTINNPSKTGSHIETFTEPGVFYYH
TQKTNSNGETELDTCVVQVLKKKQEILIELKENFAQRFYECQAGERVWIQ
WRSSLKTPTVHSTAIKKINILKTIGQTEQTVVSTNDNESTPSGVMSLMFQ
EAGVYEVFDEEHPVARCVVLVKPTKQQHEVRITKAAFLPALGSVNHGDRI
WFTWRENDLQQSFTLSKVQENILDEEQGQSNNSSTQCCQQNSNFLKTVTK
AGVYSCVMSNFGVETFKSSLTENEEPLLWCCIISQPVAKHHEIKLKDGEF
VPDAIHISRSDFLWFKWSSTKDVHSIKELRISKDAVQKLSLQCPIQPGFG
ACVNQFNQPGTYVIKGVGSEEQVLLTVIVGNEVNLRKLQVKKKRVIDDPV
VCTNKDIVCWMWPKGVASSIDVFHEEKEESEDVENTLFSSRRCYGQTFNK
QGVHHFNCSSFVTNVSERGDHPSGGIWSSVLVDNLEEKHILPLLQIKSKK
ATLNINKGQDILFAYSTSREDSWTWTVTSNGQVLNFPNIFLPHAGRLFYF
SNTGVYHVNIKSKNSSFESTINVVESGKQTQAPSIAPGYMEGGSVEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035551XLOC_035551Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00056412TCONS_00056412Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008972Cupredoxin
IPR026876Fn3_assoc_repeat
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008972CupredoxinGENE3D2.60.40.420coord: 420..609
e-value: 0.063
score: 13.2
coord: 94..191
e-value: 0.17
score: 11.8
coord: 1062..1163
e-value: 0.02
score: 14.8
IPR008972CupredoxinGENE3D2.60.40.420coord: 2..93
e-value: 0.018
score: 15.0
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 432..509
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 1067..1150
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 101..175
IPR026876Fn3 associated repeatPFAMPF13287Fn3_assoccoord: 750..808
e-value: 8.7E-7
score: 28.9

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056412-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top