TCONS_00055957-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055957-protein
Unique NameTCONS_00055957-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1149

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055957-protein ID=TCONS_00055957-protein|Name=TCONS_00055957-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1149bp
MVEFNKEPLVVWLQSYLDGPITSNAELSNGIALSTVLKLIDPVVFNNIRI
QQTLINDTATKAQNLVEILHCIKKFYQVKLQQLIIMKMPDILTVAKEPET
ELSRKEMTTILLLILGCAVQCDRKEEFIEHITEMDVQIQRGLVASIQEIT
ENQENVIPYRVSELSEMPQQNLVTLAESLYYQLQKVLEQTDEYVETILDL
ALLQENDEHNDSFEESPRFRPRNPLIPKTSFRSTNILQANRQRLQSIQAD
LDDRNAYINELKEDLDNCKRQLDNVRLENKQLVNEAAWAKSYRDELDILK
AEIEQNAKYQAENVKLKEKIRDMEYYKNKYEEIKEQSDFLYESKLILEER
VAGSSSKITRFTRLEEENSRLYSQVKVLMEEREDDQKRIRDLVDEVAKLS
MEKQETLSACSVMNAELDGLRLQKDGDGLNMPLMMEYSQSTDFMRLEREN
KHLINLIENLRTSTPDSRARQLEEENRALSDNIFEYKTMISKLTKALVIH
EETILSKTPNIKSLLSEKDNNRHLSVVIGSQSDNIKNLQGTLNKRKSDLE
KTTGELETLTKELAERGVIIDTKTLQDAIAIGLSNGHAENKSSLVSMSHR
EEYKSTAVNVSLEKQVKETTKTNAKLTTKLTQKTEEADQLQRRIKDVETY
GQKVEEQLQDREKDISSLERKIEQKATENKTLQQNALLQSDKVTALEERV
EHLLSSANEDTKKINKSLELKLQRISELETRLFDHDELEKNFKKTEEHLK
IKEQKITSLEDEVQTFEARHRDLEVDYAKAKNNCMKLEHSIKLKDEKILA
LESSVDELTMTANSKQSERIALLMKSLDGRGTDITELEKKVEELMEKNSK
LKAEKREKMERIQSLEESMKENESRDMVEKDKQMLDDRVKVLNKQLTERE
GHIDEIEVKLEELNNTLNKTKRTLQHKDDKIEAMEQKLHEYDDLCHQKER
LSKLLDERSKKILELEMNLDSLENEKMRLERTMAQKQSEYESATENLGTL
EASITDQSSLSKLIEIKDNKISSLQNTMYEHEETMADLENQLSENEGKIK
KLKHALKLKEGKIVELENSVDKMEELETKNEKLNLALEMKQSKMCELEDK
LDKMADVSRNNSRLKENLEAKDDKIISLEQRIDDLEDAVKMNERLNQQX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_035223XLOC_035223Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055957TCONS_00055957Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008636Hook-related_fam
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1097..1148
NoneNo IPR availableCOILSCoilCoilcoord: 443..463
NoneNo IPR availableCOILSCoilCoilcoord: 361..402
NoneNo IPR availableCOILSCoilCoilcoord: 708..728
NoneNo IPR availableCOILSCoilCoilcoord: 735..790
NoneNo IPR availableCOILSCoilCoilcoord: 609..685
NoneNo IPR availableCOILSCoilCoilcoord: 1021..1093
NoneNo IPR availableCOILSCoilCoilcoord: 542..562
NoneNo IPR availableCOILSCoilCoilcoord: 251..285
NoneNo IPR availableCOILSCoilCoilcoord: 469..489
NoneNo IPR availableCOILSCoilCoilcoord: 299..336
NoneNo IPR availableCOILSCoilCoilcoord: 834..1003
NoneNo IPR availableGENE3D1.20.5.730coord: 689..767
e-value: 0.063
score: 12.8
coord: 610..682
e-value: 0.0022
score: 17.5
coord: 946..1006
e-value: 0.27
score: 10.8
coord: 873..944
e-value: 5.3E-4
score: 19.5
NoneNo IPR availableGENE3D1.20.120.330coord: 1071..1149
e-value: 0.044
score: 12.9
NoneNo IPR availableGENE3D1.20.5.50coord: 1007..1033
e-value: 0.0064
score: 15.7
NoneNo IPR availableGENE3D1.20.5.1070coord: 182..288
e-value: 0.47
score: 10.0
NoneNo IPR availableGENE3D1.20.1170.10coord: 305..580
e-value: 5.1E-6
score: 25.1
NoneNo IPR availableGENE3D1.20.5.50coord: 768..872
e-value: 0.0077
score: 15.4
NoneNo IPR availableGENE3D1.20.5.50coord: 1034..1070
e-value: 2.9E-6
score: 26.6
NoneNo IPR availableSUPERFAMILY116907Hook domaincoord: 4..156
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 831..1008
IPR008636Hook-related protein familyPFAMPF05622HOOKcoord: 8..564
e-value: 2.1E-28
score: 98.8

Blast
[Close]
BLAST of TCONS_00055957-protein vs. Swiss-Prot (Human)
Match: DAPLE (Protein Daple OS=Homo sapiens GN=CCDC88C PE=1 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 4.194e-65
Identity = 261/968 (26.96%), Postives = 473/968 (48.86%), Query Frame = 0 
Query:    4 FNKEPLVVWLQSYLDGPITSNAE--------LSNGIALSTVLKLIDPVVFNNIRIQQTLINDTATKAQNLVEILHCIKKFYQVKLQQLIIMKMPDILTVAKEPETELSRKEMTTILLLILGCAVQCDRKEEFIEHITEMDVQIQRGLVASIQEITENQENVIPYRVSELSEMPQQNLVTLAESLYYQLQKVLEQTDEYVETILDLALLQENDEHNDSFEESPRFRPRNPLIPKTSFRSTNI----------------LQANRQRLQSIQADLDDRNAYINELKEDLDNCKRQLDNVRLENKQLVNEAAWAKSYRDELDILKAEIEQNAKYQAENVKLKEKIRDMEYYKNKYEEIKEQSDFLYESKLILEERVAGSSSKITRFTRLEEENSRLYSQVKVLMEEREDDQKRIRDLVDEVAKLSMEKQETLSACSVMNAELDGLRLQKD-GDGLNMPLMMEYSQ--STDFMRLERENKHLINLIENLRTST-----PDSRARQLEEENRALSDNIFEYKTMISKLTKALVIHEETILSKTPNIKSLLSEKDNNRHLSVVIGSQSDNIKNLQGTLNKRKSDLEKTTGELETLTKELAERGVIIDTKTLQDAIAIGLSNGHAENKSSLVSMSHREEYKSTAVNVSLEKQVKETTKTNAKLTTKLTQKTEEADQLQRRIKDVETYGQKVEEQLQDREKDISSLERKIEQKATENKTLQQNALLQSDKVTALE------ERVEHLLSSANEDTKKINKSLELKLQRIS------ELETRLFDHDELEKNFKKTEEHLKIKEQKITSLEDEVQTFE-----------------ARHRDLEVDYAKAKNNCMKLEHSIKLKDEKILALESSVDELTMTANSKQSERIALLMKSLDGRGTDITELEKKVEELMEKNSKLKAEKREKMERIQSLEESMKENESRDMVEKDKQMLDDRVKVLNKQLTEREGHIDEIEVKL 910
            F + PLV W++++  GP  S ++        L +GI L+ ++  IDP   N  RI + + ND   + QNL  ++  IK +YQ  LQQLI+M +P++L + ++P +  S +E+  +LLL+LGCAVQC+RKEEFIE I ++D++ Q G+VA IQE+T NQENV   +  EL ++  + L  L+ S+   L+++++Q DE  E I+DL   QE D        SP        I  +S  ST                  L   + RL+ ++ +L+D+   + + + ++D    +L  V+ EN QL  +A  A++YRDELD L+ +  +  + + E  + KEK+ D+++YK + EE++E +  L E+K +LEE++  + ++  +   LE+EN +L S++  L  +R+ D+KRI +L++E   L + ++++++  + +  EL+ L    D  D      + E ++  S+  ++LE+EN+ L + I+ LR ++        +  +LE+EN  LS  I + +T + +                        EK +N+           +++ L   L + K  L+    ++ETL  + A +  I D +  +D +          N++ + S+  R +  S A    +EK+ K   +T  +   KL+Q   E  QL R ++  +  G++ E+           LER++++   EN  L       + KVT+LE      E +EH       + + + KSL+  LQ +S      E + +  D + LE   ++  E ++    K+  +E E Q  E                  +   LE+ Y       ++L+ S++    K   LES + EL       ++ER A               L + +E L   N++L+  ++++    ++LE+ + +      +EKDK++L+   K L +Q+  ++  +D+   KL
Sbjct:   12 FLQSPLVTWVKTF--GPFGSGSQDNLTMYMDLVDGIFLNQIMLQIDPRPTNQ-RINKHVNNDVNLRIQNLTILVRNIKTYYQEVLQQLIVMNLPNVLMIGRDPLSGKSMEEIKKVLLLVLGCAVQCERKEEFIERIKQLDIETQAGIVAHIQEVTHNQENVFDLQWLELPDVAPEELEALSRSMVLHLRRLIDQRDECTELIVDLT--QERDYLQAQHPPSP--------IKSSSADSTPSPTSSLSSEDKQHLAVELADTKARLRRVRQELEDKTEQLVDTRHEVDQLVLELQKVKQENIQLAADARSARAYRDELDSLREKANRVERLELELTRCKEKLHDVDFYKARMEELREDNIILIETKAMLEEQLTAARARGDKVHELEKENLQLKSKLHDLELDRDTDKKRIEELLEENMVLEIAQKQSMNESAHLGWELEQLSKNADLSDASRKSFVFELNECASSRILKLEKENQSLQSTIQGLRDASLVLEESGLKCGELEKENHQLSKKIEKLQTQLER------------------------EKQSNQ-----------DLETLSEELIREKEQLQ---SDMETLKADKARQ--IKDLEQEKDHL----------NRA-MWSLRERSQVSSEARMKDVEKENKALHQTVTEANGKLSQLEFEKRQLHRDLEQAKEKGERAEK-----------LERELQRLQEENGRL-------ARKVTSLETATEKVEALEHESQGLQLENRTLRKSLD-TLQNVSLQLEGLERDNKQLDAENLE--LRRLVETMRFTSTKLAQMERENQQLEREKEELRKNVDLLKALGKKSERLELSYQSVSAENLRLQQSLESSSHKTQTLESELGEL-------EAERQA---------------LRRDLEALRLANAQLEGAEKDR----KALEQEVAQ------LEKDKKLLEKEAKRLWQQVELKDAVLDDSTAKL 862
The following BLAST results are available for this feature:
BLAST of TCONS_00055957-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DAPLE4.194e-6526.96Protein Daple OS=Homo sapiens GN=CCDC88C PE=1 SV=3[more]
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