TCONS_00055225-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00055225-protein
Unique NameTCONS_00055225-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length204

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00055225-protein ID=TCONS_00055225-protein|Name=TCONS_00055225-protein|organism=Clytia hemisphaerica|type=polypeptide|length=204bp
MTCINRTLLACRFCTQLRKPTVLPSSCIAIQRYLTTSKIQFDQHQISENV
KPEAGALSTGQKVKQAGKDASYMGIMLLGFGVTGTLIWYVVDELMFGFSA
NSVYSKALKLVKDDDRIQYEIGDNLKGYGEETSRGRRRHVTSQEFVVDGV
NHMRVRFYLSGSNRKATVHCEAVETSRGKFDFRYIFVEMQGFPPSEPVIV
VDNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034781XLOC_034781Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00055225TCONS_00055225Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013261Tim21
Vocabulary: Biological Process
TermDefinition
GO:0030150protein import into mitochondrial matrix
Vocabulary: Cellular Component
TermDefinition
GO:0005744mitochondrial inner membrane presequence translocase complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0005744 mitochondrial inner membrane presequence translocase complex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013261Mitochondrial import inner membrane translocase subunit Tim21PFAMPF08294TIM21coord: 62..191
e-value: 3.0E-35
score: 121.1

Blast
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BLAST of TCONS_00055225-protein vs. Swiss-Prot (Human)
Match: TIM21 (Mitochondrial import inner membrane translocase subunit Tim21 OS=Homo sapiens GN=TIMM21 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.350e-34
Identity = 61/152 (40.13%), Postives = 96/152 (63.16%), Query Frame = 0 
Query:   56 ALSTGQKVKQAGKDASYMGIMLLGFGVTGTLIWYVVDELMFGFSANSVYSKALKLVKDDDRIQYEIGDNLKGYGEETSRGRRRHVTSQEFVVDGVNHMRVRFYLSGSN--RKATVHCEAVET-SRGKFDFRYIFVEMQGFPPSEPVIVVDNR 204
            A+ T QKVK+AG+D +Y+ ++L G  +TG L + +  EL    S + +Y +AL+  +    +    G+++KGYGE T RGRR+HV   E+V DG+ H  V+FY+ GS   ++ TV+ +  E    G++DFRYIFVE++ + P   +I+ DNR
Sbjct:   94 AVPTSQKVKEAGRDFTYLIVVLFGISITGGLFYTIFKELFSSSSPSKIYGRALEKCRSHPEVIGVFGESVKGYGEVTRRGRRQHVRFTEYVKDGLKHTCVKFYIEGSEPGKQGTVYAQVKENPGSGEYDFRYIFVEIESY-PRRTIIIEDNR 244
The following BLAST results are available for this feature:
BLAST of TCONS_00055225-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TIM219.350e-3440.13Mitochondrial import inner membrane translocase su... [more]
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