TCONS_00054815-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00054815-protein
Unique NameTCONS_00054815-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length373

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00054815-protein ID=TCONS_00054815-protein|Name=TCONS_00054815-protein|organism=Clytia hemisphaerica|type=polypeptide|length=373bp
MTEGKGMIDPREHCEKRPIKMIDQACQFDGPVEKKTLKDASTSMSSPEIV
SQRSQDHVKNKNEEDQHHHSMSSQFIYPRNYEPPEKKDKCIHCIAAAAAR
RAANSQKAAHSASPPTIANVFPPPSSTENHHSPPEIFQASRPSMTRPTVH
YEARHTGYPEDVKPVLVHAYDPSYTTQQASSTVTLIDTSRVYSRAPVEKI
VVVQPVYHAPLPSVGTPSSTPMDFVPSLVVGATGNSMENSPAKMKETSVG
SSMVSSPGSPLNLSNSNAKRRTHQCTYKGCNKIYTKSSHLKAHMRTHTGE
KPYKCQWEGCAWKFARSDELTRHYRKHTGMRPFKCTKCERSFSRSDHLSL
HMKRHVGEIDKPPTQVEIKPKMM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_034531XLOC_034531Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00054815TCONS_00054815Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 303..327
e-value: 2.3E-4
score: 30.5
coord: 273..297
e-value: 0.0026
score: 27.0
coord: 333..355
e-value: 0.0026
score: 27.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 335..355
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 305..327
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 275..297
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 333..360
score: 13.256
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 303..332
score: 13.775
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 273..302
score: 15.168
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 319..358
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 287..331
NoneNo IPR availableGENE3D3.30.160.60coord: 303..319
e-value: 1.3E-13
score: 50.3
NoneNo IPR availableGENE3D3.30.160.60coord: 343..371
e-value: 3.5E-9
score: 36.0
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 333..355
e-value: 5.3E-5
score: 23.4
coord: 303..327
e-value: 8.5E-4
score: 19.6
coord: 273..297
e-value: 4.5E-4
score: 20.4
NoneNo IPR availableGENE3D3.30.60.20coord: 287..302
e-value: 1.3E-4
score: 21.3
NoneNo IPR availableGENE3D2.20.28.10coord: 320..342
e-value: 9.2E-13
score: 47.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..268
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 50..286
e-value: 4.1E-10
score: 39.3

Blast
[Close]
BLAST of TCONS_00054815-protein vs. Swiss-Prot (Human)
Match: KLF3 (Krueppel-like factor 3 OS=Homo sapiens GN=KLF3 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 3.100e-51
Identity = 80/137 (58.39%), Postives = 99/137 (72.26%), Query Frame = 0 
Query:  223 DFVPSLVVGATGNSMENSPAKMKETSVGSSMVSSPGS---PLNLSNSNAKRRTHQCTYKGCNKIYTKSSHLKAHMRTHTGEKPYKCQWEGCAWKFARSDELTRHYRKHTGMRPFKCTKCERSFSRSDHLSLHMKRHV 356
            D+ P  +     NS+    A ++E     S++  PG    P+   ++  KRR H+C Y GCNK+YTKSSHLKAH RTHTGEKPYKC WEGC WKFARSDELTRH+RKHTG++PF+C  C+RSFSRSDHL+LH KRH+
Sbjct:  209 DYYPEEMSPPLMNSVSPPQALLQENH--PSVIVQPGKRPLPVESPDTQRKRRIHRCDYDGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARSDELTRHFRKHTGIKPFQCPDCDRSFSRSDHLALHRKRHM 343
The following BLAST results are available for this feature:
BLAST of TCONS_00054815-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLF33.100e-5158.39Krueppel-like factor 3 OS=Homo sapiens GN=KLF3 PE=... [more]
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