TCONS_00053853-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053853-protein
Unique NameTCONS_00053853-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053853-protein ID=TCONS_00053853-protein|Name=TCONS_00053853-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
MGVHGSKSKIPPQQLCELVNHTHFDSKELKKWYNGFLKECPDNQMSKEQF
IKLYGSFYAHGNAAKFAQHVFRTFDYNSDGNIDFREFIMSLSVTTRGSID
EKLRWAFQIYDIDGNGFITQNELFSIMKAVQNMVGAIDDENIMSKSRMSN
VFNKMDLNKDCKLSLEEFLTGAREDETFVHLLSAYNGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033983XLOC_033983Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053853TCONS_00053853Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 70..91
score: 66.26
coord: 94..113
score: 56.15
coord: 116..134
score: 38.46
coord: 24..43
score: 51.73
coord: 10..24
score: 31.54
coord: 163..183
score: 42.67
NoneNo IPR availableGENE3D1.10.238.10coord: 103..188
e-value: 8.5E-19
score: 66.7
NoneNo IPR availableGENE3D1.10.238.110coord: 3..102
e-value: 7.6E-30
score: 103.2
IPR002048EF-hand domainSMARTSM00054efh_1coord: 147..175
e-value: 0.64
score: 19.1
coord: 102..130
e-value: 2.9E-6
score: 36.8
coord: 66..94
e-value: 0.94
score: 18.0
IPR002048EF-hand domainPFAMPF13202EF-hand_5coord: 69..88
e-value: 5.5E-4
score: 19.2
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 100..171
e-value: 9.9E-12
score: 45.1
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 98..133
score: 13.593
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 62..97
score: 10.915
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 143..178
score: 10.106
IPR002048EF-hand domainCDDcd00051EFhcoord: 67..128
e-value: 8.05289E-11
score: 53.7057
IPR002048EF-hand domainCDDcd00051EFhcoord: 102..173
e-value: 2.3267E-12
score: 57.9429
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 111..123
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 75..87
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 6..182

Blast
[Close]
BLAST of TCONS_00053853-protein vs. Swiss-Prot (Human)
Match: NCALD (Neurocalcin-delta OS=Homo sapiens GN=NCALD PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.667e-65
Identity = 88/179 (49.16%), Postives = 133/179 (74.30%), Query Frame = 0 
Query:    8 SKIPPQQLCELVNHTHFDSKELKKWYNGFLKECPDNQMSKEQFIKLYGSFYAHGNAAKFAQHVFRTFDYNSDGNIDFREFIMSLSVTTRGSIDEKLRWAFQIYDIDGNGFITQNELFSIMKAVQNMVGAI----DDENIMSKSRMSNVFNKMDLNKDCKLSLEEFLTGAREDETFVHLL 182
            SK+ P+ + +L+  T F   E+++WY GFL++CP   +S E+F K+YG+F+ +G+A+KFA+HVFRTFD N DG IDFREFI++LSVT+RG +++KL+WAF +YD+DGNG+I++ E+  I++A+  MV ++    +DE+   K R   +F +MD N+D KLSLEEF+ GA+ D + V LL
Sbjct:    6 SKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEK-RTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183
The following BLAST results are available for this feature:
BLAST of TCONS_00053853-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCALD1.667e-6549.16Neurocalcin-delta OS=Homo sapiens GN=NCALD PE=1 SV... [more]
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