TCONS_00053740-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053740-protein
Unique NameTCONS_00053740-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length461

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053740-protein ID=TCONS_00053740-protein|Name=TCONS_00053740-protein|organism=Clytia hemisphaerica|type=polypeptide|length=461bp
MDTSSLSSSNSYMNYYDMVTYDSSINMDTYSDETSVNTDDFYHDNHSTVT
TNDSYYGGEFDNFSLDSRCFYEDTDFSSTEGSRAGSITTMSRSTPDSSLH
SSSMGLNKGSLNVIQRIPRKQSRGILKTKNGSFQNDNNNNINVNRNSQSA
DEGTTITHETLEKLRETELEDVLQYARDIINPDPKAKITFCTQSAKVVEG
SFKHMLSIKELSSKTGAFKYRTIDILRNTDEEIGISLRRGDGWEKGEGIY
VSRISLGSIFDQFEILRVGDEIVQVNKVDVKKMSVDDVIRLMHIPEKLSV
TVKMLTPFSKKRLDRSGIEELKKNRYLSHSTGHLNNQRKFLPPTVSSRSN
ECLSKVAHLQIGDKRQFNLNNRHQQRTKQRSNTAMDTTNTNSTFSSLHSD
FQRQRDSSQKAIKISPYRSMEGGKIASSGGGGRCLSPIHEFSNATTQMQR
KQSYVRWFDES
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033903XLOC_033903Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053740TCONS_00053740Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 231..308
e-value: 3.0E-7
score: 40.1
IPR001478PDZ domainPFAMPF00595PDZcoord: 223..302
e-value: 5.1E-11
score: 42.7
IPR001478PDZ domainPROSITEPS50106PDZcoord: 222..292
score: 13.993
IPR001478PDZ domainSUPERFAMILY50156PDZ domain-likecoord: 222..293
NoneNo IPR availableGENE3D2.30.42.10coord: 216..306
e-value: 4.7E-15
score: 55.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 367..410
NoneNo IPR availableCDDcd00992PDZ_signalingcoord: 221..303
e-value: 2.73583E-14
score: 67.2066

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053740-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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