TCONS_00053297-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053297-protein
Unique NameTCONS_00053297-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length123

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053297-protein ID=TCONS_00053297-protein|Name=TCONS_00053297-protein|organism=Clytia hemisphaerica|type=polypeptide|length=123bp
MSTAQALKLVQYVVIRRDLLDIMKWPVGAVIAQACHACTAVIHLNYGDDH
TQEYLKDLDNMHKVVLEAKDEETIAKISQVLVDNDIKHKLWTEQPENYPT
CLALKPYPKDDVHKYLKKLKLFK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033641XLOC_033641Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053297TCONS_00053297Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023476Pep_tRNA_hydro_II_dom
IPR002833PTH2
Vocabulary: Molecular Function
TermDefinition
GO:0004045aminoacyl-tRNA hydrolase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004045 aminoacyl-tRNA hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023476Peptidyl-tRNA hydrolase II domainGENE3D3.40.1490.10coord: 3..122
e-value: 9.6E-30
score: 102.5
IPR023476Peptidyl-tRNA hydrolase II domainSUPERFAMILY102462Peptidyl-tRNA hydrolase IIcoord: 9..122
IPR002833Peptidyl-tRNA hydrolase, PTH2PFAMPF01981PTH2coord: 10..122
e-value: 2.5E-24
score: 85.7
NoneNo IPR availableCDDcd02429PTH2_likecoord: 9..113
e-value: 9.81533E-56
score: 170.662

Blast
[Close]
BLAST of TCONS_00053297-protein vs. Swiss-Prot (Human)
Match: PTRD1 (Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sapiens GN=PTRHD1 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 9.363e-35
Identity = 64/123 (52.03%), Postives = 86/123 (69.92%), Query Frame = 0 
Query:    2 STAQALKLVQYVVIRRDLLDI-MKWPVGAVIAQACHACTAVIHLNYGDDHTQEYLKDLDNMHKVVLEAKDEETIAKISQVLVDNDIKHKLWTEQPENYPTCLALKPYPKDDVHKYLKKLKLFK 123
            S A+   LVQY+V+R+DL      WP GA++AQACHA TA +H +    HT  YL++L  M KVVLEA DE T+ ++++ L   +I H LW EQPEN  TC+AL+PYPK++V +YLKK +LFK
Sbjct:   18 SGAEPQVLVQYLVLRKDLSQAPFSWPAGALVAQACHAATAALHTHRDHPHTAAYLQELGRMRKVVLEAPDETTLKELAETLQQKNIDHMLWLEQPENIATCIALRPYPKEEVGQYLKKFRLFK 140
The following BLAST results are available for this feature:
BLAST of TCONS_00053297-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTRD19.363e-3552.03Putative peptidyl-tRNA hydrolase PTRHD1 OS=Homo sa... [more]
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