TCONS_00053215-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00053215-protein
Unique NameTCONS_00053215-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length829

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00053215-protein ID=TCONS_00053215-protein|Name=TCONS_00053215-protein|organism=Clytia hemisphaerica|type=polypeptide|length=829bp
MLRAGLLGKQRASLLTKSSRFLSNKTLPTSAEVVITGGGVIGTSIAYHLT
QLGWKDIVILEQGSLGCGTSWHAAGLVKSIHSNHENTQQSKYAFELFDKF
EQDFGIGFKKCGSLILAQHEDRALSLRKSYQMGRENGVDCHLISAQEAQQ
LNPLISTEGVKLAMMVPGDSVVNPTDLIQAYTKGAVKNGATKVFEGVQVL
NLNSSERRLITSVDTDQGNIECGHFINAAGLWSRELGLKSQPPVQLPLHA
CQHFYIVTKPYNVDPMMPVTRDHDGHLYFREWSGGLMAGGFEPDAMSCFY
EGIPGKFEFQLLEEDWDHFDYMLGGILKRFPSIANAEIRNFINGPESFSP
DGRPHLSFAKEFDNYIALCGLSSNGIVGSPGYGKMAAELLTFGQSEHWNP
YHYSVHRMAHGSNNKFLNEKVAPAILTTRYEFVYPETTYKAFPRNVLTSP
IHESLEKSGAVWNQENNWEIPKYFDDCGDVRENTLGKPNWLPNVQREMKA
CEDSVGLIDLSSQSVFELQFDSSVSIGEFFEHFDIDPSAMAVHGKETPIF
DEKDECIALVSISNTQNKRLYLRSNANVHSFLLSSLEQYAETNDVIVRDV
TGSYAVFRLVGPNVDALLDKLISPPYSTEDLYKTSSMVMDIGYACDVIVM
SSSIGEGWDLMIPVQFSQGLYRLLMEHGQDYGMTNVGHIAMESLRVQTKI
PKVPNEVGLRTEKQFVKSIFSDKETGPVHQKSLHTIKIQVVETNWPWGGE
TLLHSQTREKVGSISSLGYTSDSNILKALSVVDQSKCEDGDDVIVCVGTD
EYVGRIIDYVKNNDNVNPIEKFDADSIRL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033594XLOC_033594Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00053215TCONS_00053215Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006076FAD-dep_OxRdtase
IPR006222GCV_T_N
IPR023753FAD/NAD-binding_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 33..389
e-value: 7.5E-59
score: 200.0
NoneNo IPR availableGENE3D3.30.9.10coord: 188..349
e-value: 3.6E-31
score: 107.8
NoneNo IPR availableGENE3D3.30.1360.120coord: 576..698
e-value: 2.7E-11
score: 42.8
coord: 446..527
e-value: 1.4E-9
score: 37.2
NoneNo IPR availableGENE3D3.40.50.20coord: 21..84
e-value: 0.0014
score: 18.2
NoneNo IPR availableGENE3D3.30.9.10coord: 110..187
e-value: 3.7E-10
score: 39.5
NoneNo IPR availableSUPERFAMILY103025Folate-binding domaincoord: 444..707
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 248..349
IPR006222Glycine cleavage T-protein-like, N-terminalPFAMPF01571GCV_Tcoord: 452..706
e-value: 9.4E-29
score: 100.4
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 32..246
coord: 350..436

Blast
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BLAST of TCONS_00053215-protein vs. Swiss-Prot (Human)
Match: PDPR (Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial OS=Homo sapiens GN=PDPR PE=1 SV=2)

HSP 1 Score: 392.504 bits (1007), Expect = 2.181e-123
Identity = 257/843 (30.49%), Postives = 436/843 (51.72%), Query Frame = 0 
Query:    6 LLGKQRASLLTKSSRFLSNKT---------LPTSAEVVITGGGVIGTSIAYHLTQLGWKDIVILEQGSLGCGTSWHAAGLVKSIHSNHENTQQSKYAFELFDKFEQDFGI--GFKKCGSLILAQHEDRALSLRKSYQMGRENGVDCHLISAQEAQQLNPLISTEGVKLAMMVPGDSVVNPTDLIQAYTKGAVKNGATKVFEGVQVLNLNSSERRLITSVDTDQGNIECGHFINAAGLWSRELGLKSQPPVQLPLHACQHFYIVTKPYN--VDPMMPVTRDHDGHLYFREWSGGLMAGGFEPDAMSCFYEGIPGKFEFQLLEEDWDHFDYMLGGILKRFPSIANAEIRNFINGPESFSPDGRPHLSFAKEFDNYIALCGLSSNGIVGSPGYGKMAAELLTFGQSEHWNPYHYSVHRM-AHGSNNKFLNEKVAPAILTTRYEFVYPETTYKAFPRNVLTSPIHESLEKSGAVWNQENNWEIPKYF-----DDCGDVRENTLGKPNWLPNVQREMKACEDSVGLIDLSSQSVFELQF--DSSVSIGEFFEHFDID-PSAMAVHGKETPIFDEKDECIALVSISNTQNKRLYLRSNANVHSFLLSSLEQYA-ETNDVIVRDVTGSYAVFRLVGPNVDALLDKLISPPYSTEDLYKTSSMVMDIGYACDVIVMS-SSIGE-GWDLMIPVQFSQGLYRLLMEHGQDYGMTNVGHIAMESLRVQTKIP---------KVPNEVGLRTEKQFVK--------SIFSDKETGPVHQKSLH-TIKIQVVETNWPWGGETLLHSQTREKVGSISSLGYTSDSNILKALSVVDQSKCEDGDDVIVCVGTDEYVGR 805
            ++G+QRAS   ++     N T         LPT A+VVI GGG+ GTS+AYHL+++GWKDIV+LEQG L  G++   AG++ +        + + Y+ +L+ + EQ+ GI  G+ + GS+ LAQ +DR +SL++        G+   +IS ++  +L+ L++   +  AM VP D+VV+  D+  A    A +NG  ++++   VL++   + + +T V+TD+G IEC +F+N AG W+ ELGL ++ PV +PLHAC+HFY++T+P    +    P   D DG +Y R W GG+++GGFE +    F EG   + E Q L+EDWDHF+ +L  +L+R P +   EI   +N PE+F+PD R  +  +     Y  L G++S G+    G GK  AE +  G     N +   + R  A  S+  FL  +V   ++   Y+   P   ++   R + TSP+++ L+  GA W +++ +E PKYF     D     +  T  KP+W   V+ E+K C+++V +ID+SS + FE+    D ++ + ++    D+D P    VH   T + +E        SI+    +  ++ S  +      + L+++  + +++++ DVT  Y    L+GP    +L +L   P + +         M +GYA  + VMS +  GE G+ L IP++++  +Y  +M  GQ YG+ N G+ A+ SLR++               P E G  +  +  K        ++   K+ G   + ++            WPW GE +   +  + VG  +S  Y+        L  V     + G++ +V   T +++ R
Sbjct:    9 IVGRQRASPGWQNWSSARNSTSAAEARSMALPTQAQVVICGGGITGTSVAYHLSKMGWKDIVLLEQGRLAAGSTRFCAGILSTARHLTIEQKMADYSNKLYYQLEQETGIQTGYTRTGSIFLAQTQDRLISLKRINAGLNVIGIPSEIISPKKVAELHHLLNVHDLVGAMHVPEDAVVSSADVALALASAASQNG-VQIYDRTSVLHVMVKKGQ-VTGVETDKGQIECQYFVNCAGQWAYELGLSNEEPVSIPLHACEHFYLLTRPLETPLQSSTPTIVDADGRIYIRNWQGGILSGGFEKNPKPIFTEG-KNQLEIQNLQEDWDHFEPLLSSLLRRMPELETLEIMKLVNCPETFTPDMRCIMGESPAVQGYFVLAGMNSAGLSFGGGAGKYLAEWMVHGYPSE-NVWELDLKRFGALQSSRTFLRHRVM-EVMPLMYDLKVPRWDFQT-GRQLRTSPLYDRLDAQGARWMEKHGFERPKYFVPPDKDLLALEQSKTFYKPDWFDIVESEVKCCKEAVCVIDMSSFTKFEITSTGDQALEVLQYLFSNDLDVPVGHIVH---TGMLNEGGGYENDCSIARLNKRSFFMISPTDQQVHCWAWLKKHMPKDSNLLLEDVTWKYTALNLIGPRAVDVLSELSYAPMTPDHFPSLFCKEMSVGYANGIRVMSMTHTGEPGFMLYIPIEYALHVYNEVMSVGQKYGIRNAGYYALRSLRIEKFFAFWGQDINNLTTPLECGRESRVKLEKGMDFIGRDALLQQKQNGVYKRLTMFILDDHDSDLDLWPWWGEPIY--RNGQYVGKTTSSAYSYSLERHVCLGFVHNFSEDTGEEQVV---TADFINR 837
The following BLAST results are available for this feature:
BLAST of TCONS_00053215-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PDPR2.181e-12330.49Pyruvate dehydrogenase phosphatase regulatory subu... [more]
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