TCONS_00053186-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00053186-protein
Unique Name	TCONS_00053186-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	529

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00053186-protein ID=TCONS_00053186-protein|Name=TCONS_00053186-protein|organism=Clytia hemisphaerica|type=polypeptide|length=529bp
MDPLFNKTSFSYAGNYTMQSNPNMTLNSTNETFDYHNISLIFSINNHQNI
SNTTQPEVTSIPQSIITIIFVFNGILSLLGIIGNLFVCFIIVRGRKMYTI
ANLFLMNLAIADMCVLVISYPLWVLQSLEPNSWPFGSVLCKIIPTISDAF
YGVSLGCMTTISIHRYRMILHAMGKQLTFPQSKMIITGIWFISLLTISVP
LYPVLRYQEFSPQGVVRCQSRWPSKTYEQCYQLFLLIFWYICPLLIILFT
FIRIKLYLEKQMTYEWLQGSEHTLLIANHIMGIKKALRMLAPVVIVFAIL
MLPWNIIRLVSIFTEVHLVDNVHIYIMVSGTMLVANSVSNPFTYYIMSKE
FRIEFQKQFWLLKVKLGIESNEHQKFTLESDKYGRTVVRRTASFLDTTSV
ADSKNGNFKRPRTATQSSDVLTPNISHRSPPSSIMNTYEPVNEIIRNAPQ
KNSTGGNGAYDLLRFTPPTLTPLNNNTTLIAELYSIEEENSTDLDSPECF
VKNVTKLNGITETKFHAIIDSDDLKETRL

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_033569	XLOC_033569	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00053186	TCONS_00053186	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000276	GPCR_Rhodpsn
IPR017452	GPCR_Rhodpsn_7TM

Vocabulary: **Biological Process**
Term	Definition
GO:0007186	G-protein coupled receptor signaling pathway

Vocabulary: **Molecular Function**
Term	Definition
GO:0004930	G-protein coupled receptor activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G-protein coupled receptor signaling pathway
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004930	G-protein coupled receptor activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000276	G protein-coupled receptor, rhodopsin-like	PRINTS	PR00237	GPCRRHODOPSN	coord: 232..255 score: 22.32 coord: 181..202 score: 19.7 coord: 68..92 score: 24.17 coord: 147..169 score: 23.8 coord: 101..122 score: 33.0 coord: 326..352 score: 26.84 coord: 286..310 score: 27.1
IPR000276	G protein-coupled receptor, rhodopsin-like	PFAM	PF00001	7tm_1	coord: 83..344 e-value: 4.6E-38 score: 130.9
IPR000276	G protein-coupled receptor, rhodopsin-like	PROSITE	PS00237	G_PROTEIN_RECEP_F1_1	coord: 153..169
None	No IPR available	GENE3D	1.20.1070.10		coord: 36..422 e-value: 1.7E-61 score: 207.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 405..433
None	No IPR available	SUPERFAMILY	81321	Family A G protein-coupled receptor-like	coord: 50..367
IPR017452	GPCR, rhodopsin-like, 7TM	PROSITE	PS50262	G_PROTEIN_RECEP_F1_2	coord: 83..344 score: 33.852

Blast

[Close]

BLAST of TCONS_00053186-protein vs. Swiss-Prot (Human)
Match: OX2R (Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.401e-27
Identity = 94/365 (25.75%), Postives = 169/365 (46.30%), Query Frame = 0

Query:   75 ILSLLGIIGNLFVCFIIVRGRKMYTIANLFLMNLAIADMCVLVISYPLWVLQSLEPNSWPFGSVLCKIIPTISDAFYGVSLGCMTTISIHRYRMILHAMGKQLTFPQSKMIITGIWFISLLTISVPLYPVLRYQEFSPQGVVR------CQSRWPSKTYEQCYQLFLLIFWYICPLLIILFTFIRI--KLYLEK--------QMTYEWLQ------------GSEHTLLIA--NHIMGIKKALRMLAPVVIVFAILMLPWNII----RLVSIFTEVHLVDNVHIYIMVSGTMLVANSVSNPFTYYIMSKEFRIEFQKQFWLLKVKLGIESNEHQKFTLESDKYGRTVVRRTASFLDTTSVADSKN 405
            I+ ++ +IGN+ VC  + +   M T+ N F++NL++AD+ V +   P  ++  +   +W FG  LCK+IP +      VS+  ++ I++ R+  I H +  + T  +++  I  IW +S + I +P   V+      P    +      C  RW  + Y + Y +   +  Y+ PL +++  +++I  KL+  +        Q  ++ LQ             S  + + A    I   +K  RML  V++VFAI  LP +I+    R+  +F      + V+ +   S  ++ ANS +NP  Y  +S +FR EF+  F      LG+   +  + T      GRT      S   TT +++  N
Sbjct:   63 IVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDIT-ETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKSTAKRARNSIVIIWIVSCI-IMIPQAIVMECSTVFPGLANKTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQIPGTSSVVQRKWKPLQPVSQPRGPGQPTKSRMSAVAAEIKQIRARRKTARMLMIVLLVFAICYLPISILNVLKRVFGMFAHTEDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAF--SCCCLGVHHRQEDRLT-----RGRTSTESRKSL--TTQISNFDN 416

The following BLAST results are available for this feature:

BLAST of TCONS_00053186-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00053186-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OX2R	2.401e-27	25.75	Orexin receptor type 2 OS=Homo sapiens GN=HCRTR2 P...	[more]

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TCONS_00053186-protein (polypeptide) - C. hemisphaerica