TCONS_00052254-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00052254-protein
Unique NameTCONS_00052254-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00052254-protein ID=TCONS_00052254-protein|Name=TCONS_00052254-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
MVKDSYQNIANGLTNDVLLAISAGLSILGCTLILTTYMCYKEIRTVSRHI
VVCISISDIITTASNLSAIFISPEIDSETDEIDNISCTVQSFVGTSAVLW
SFLWTMVLAMYLYLDLVKENKTLGKRLIWPWSHLICWIAPLGINMVALFL
HKLGNSGDRNTAGWCWISVFVDNYGDAKLWMLVDGKGIELLTYVVIVILY
SRMKLWSIRQIKIPKQNEGSHLLQRNSLDAARYTDKKIILIPILFVLLRI
WGTIRFFMLLRTETLAFKGDITVFETALLYLQTIGDNLQGAINCILFCCM
TPVVRKRINKSVTSMRRQRFHLYDHLDSTSDTSSRIYQPID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_033069XLOC_033069Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00052254TCONS_00052254Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022343GCR1-cAMP_receptor
IPR017981GPCR_2-like
Vocabulary: Molecular Function
TermDefinition
GO:0004888transmembrane signaling receptor activity
Vocabulary: Biological Process
TermDefinition
GO:0007166cell surface receptor signaling pathway
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007166 cell surface receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004888 transmembrane signaling receptor activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022343GCR1-cAMP receptorPRINTSPR02001GCR1CAMPRcoord: 45..60
score: 22.45
coord: 87..105
score: 34.5
coord: 26..44
score: 35.09
NoneNo IPR availableGENE3D1.20.1070.10coord: 5..338
e-value: 5.1E-26
score: 90.8
NoneNo IPR availablePFAMPF05462Dicty_CARcoord: 16..175
e-value: 1.6E-10
score: 40.5
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0
NoneNo IPR availableSUPERFAMILY81321Family A G protein-coupled receptor-likecoord: 17..320
IPR017981GPCR, family 2-likePROSITEPS50261G_PROTEIN_RECEP_F2_4coord: 15..301
score: 16.849

Blast
[Close]
BLAST of TCONS_00052254-protein vs. Swiss-Prot (Human)
Match: GP157 (G-protein coupled receptor 157 OS=Homo sapiens GN=GPR157 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 8.806e-29
Identity = 95/297 (31.99%), Postives = 155/297 (52.19%), Query Frame = 0 
Query:   21 ISAGLSILGCTLILTTYMCYKEIRTVSRHIVVCISISDIITTASNLSAI---FISPEIDSETDEIDNISCTVQSFVGTSAVLWSFLWTMVLAMYLYLDLVKENK-TLGKRLIWPWSHLICWIAPLGINMVALFLHKLGNSGDRNTAGWCWISVFVDNYGDAKLWMLVDGKGIELLTYVVIVILYSRMKLWSIRQIKI-----PKQNEGSHLLQRNSLDAARYTDKKIILIPILFVLLRIWGTIRFFMLLRTETLAFKGDITVFETALLYLQTIGDNLQGAINCILFCCMTPVVRKRI 308
            +S  LS LG  L++ T+  + ++R+ +R +++ +S++D+++ AS    +   F  P  D          C +Q  + T A   SF WT+ +A+YLYL +V+  +     RL+W + H++ W  PL I + A+ L K+G      + GWCWI +      D  LWML+ GK  E+L YV++ +LY  ++    R         P  ++   LL+ +S+      DKK++LIP++F+ LR+W T+RF + L        G   V    L+ L  IG+  QG  NCI+F   T  VR R+
Sbjct:   20 LSCALSALGSGLLVATHALWPDLRSRARRLLLFLSLADLLSAASYFYGVLQNFAGPSWD----------CVLQGALSTFANTSSFFWTVAIALYLYLSIVRAARGPRTDRLLWAF-HVVSWGVPLVITVAAVALKKIGYDASDVSVGWCWIDL---EAKDHVLWMLLTGKLWEMLAYVLLPLLYLLVRKHINRAHTALSEYRPILSQEHRLLRHSSM-----ADKKLVLIPLIFIGLRVWSTVRFVLTL-------CGSPAVQTPVLVVLHGIGNTFQGGANCIMFVLCTRAVRTRL 290
The following BLAST results are available for this feature:
BLAST of TCONS_00052254-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GP1578.806e-2931.99G-protein coupled receptor 157 OS=Homo sapiens GN=... [more]
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