TCONS_00049346-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00049346-protein
Unique NameTCONS_00049346-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length428

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00049346-protein ID=TCONS_00049346-protein|Name=TCONS_00049346-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
MDYEMENIVNISNNDGFESPIKLSFDINNDGNFIGSCQITIETIKSRLEF
VDRLGNSFLFKPNKEEESPRPKADFKKNNRLGLGEEIEVEWEVDEQIYKL
ALREEEDVEPDDENVYLSNDIVKVEEFKKSKHKQKPKRLKNKVDHDTKKV
NLDNAENGQIEESKESNFECRVCGKSFTRKSSRTQHENGHNREPKVFKCQ
ECGKELASKSKLNIHIKTHTGEKPFECQECGKELASKSKLNIHIKTHTGE
KPFECQECGKRFVRKDNLKDHVKLHSDDKPFKCKICIKSYVRNYDLKRHM
ATHTDDKSFYCELCGKGFAEENHLQDHIARHSMDRPFKCQVCGKAFPRNY
DLTKHSKTHTDEKPFKCELCGKEFRNSDTLRNHLIIHTDEKAFECDVCGK
ALSNLRTLKRHIQMTHLNDTVKSKETSE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_031317XLOC_031317Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00049346TCONS_00049346Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
IPR022755Znf_C2H2_jaz
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 168..190
e-value: 0.054
score: 22.6
coord: 393..416
e-value: 0.0032
score: 26.7
coord: 197..219
e-value: 0.0012
score: 28.1
coord: 309..331
e-value: 0.0064
score: 25.7
coord: 253..275
e-value: 3.0E-4
score: 30.1
coord: 365..387
e-value: 3.4E-4
score: 29.9
coord: 337..359
e-value: 6.1E-4
score: 29.1
coord: 281..303
e-value: 0.0058
score: 25.8
coord: 225..247
e-value: 0.0023
score: 27.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 395..416
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 339..359
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 227..247
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 311..331
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 199..219
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 170..190
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 283..303
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 367..387
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..275
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 225..252
score: 16.145
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 365..392
score: 14.295
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 393..421
score: 11.053
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..280
score: 16.02
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 281..308
score: 12.175
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 337..364
score: 16.228
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 309..336
score: 13.775
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 168..195
score: 12.279
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 197..224
score: 16.165
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 359..411
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 318..374
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 168..219
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 262..318
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 208..262
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 393..416
e-value: 8.5E-4
score: 19.6
coord: 253..275
e-value: 1.9E-5
score: 24.8
coord: 365..387
e-value: 8.2E-5
score: 22.8
coord: 281..303
e-value: 1.4E-4
score: 22.1
coord: 197..219
e-value: 2.7E-4
score: 21.1
coord: 225..247
e-value: 5.3E-4
score: 20.2
coord: 168..190
e-value: 9.7E-4
score: 19.4
NoneNo IPR availableGENE3D2.20.28.30coord: 241..262
e-value: 2.8E-18
score: 65.3
NoneNo IPR availableGENE3D3.30.160.60coord: 226..240
e-value: 1.8E-14
score: 52.9
NoneNo IPR availableGENE3D2.40.155.10coord: 299..331
e-value: 3.7E-18
score: 66.0
NoneNo IPR availableGENE3D3.30.160.60coord: 135..178
e-value: 4.8E-6
score: 26.1
NoneNo IPR availableGENE3D3.30.160.60coord: 332..350
e-value: 1.5E-14
score: 53.3
NoneNo IPR availableGENE3D3.30.160.60coord: 179..205
e-value: 2.1E-13
score: 49.7
NoneNo IPR availableGENE3D3.30.160.60coord: 351..370
e-value: 4.0E-19
score: 68.3
NoneNo IPR availableGENE3D2.40.155.10coord: 206..225
e-value: 1.4E-14
score: 54.3
NoneNo IPR availableGENE3D2.10.69.10coord: 263..298
e-value: 8.9E-22
score: 76.6
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 337..360
e-value: 3.9E-6
score: 26.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 391..421
e-value: 6.6E-9
score: 35.5
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 371..390
e-value: 3.7E-17
score: 61.6
IPR022755Zinc finger, double-stranded RNA bindingPFAMPF12171zf-C2H2_jazcoord: 309..328
e-value: 5.7E-5
score: 23.2

Blast
BLAST of TCONS_00049346-protein vs. Swiss-Prot (Human)
Match: OZF (Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 PE=1 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.295e-73
Identity = 118/249 (47.39%), Postives = 155/249 (62.25%), Query Frame = 0
Query:  163 SKESNFECRVCGKSFTRKSSRTQHENGHNREPKVFKCQECGKELASKSKLNIHIKTHTGEKPFECQECGKELASKSKLNIHIKTHTGEKPFECQECGKRFVRKDNLKDHVKLHSDDKPFKCKICIKSYVRNYDLKRHMATHTDDKSFYCELCGKGFAEENHLQDHIARHSMDRPFKCQVCGKAFPRNYDLTKHSKTHTDEKPFKCELCGKEFRNSDTLRNHLIIHTDEKAFECDVCGKALSNLRTLKRH 411
            ++E  FEC  CGK+F++K    +H+N H  E K+F+C ECGK  + K  L  H K HTGEKPFEC++CGK    KS L  H +THTGEKPF C+ECGK F  K NL +H K+H  +KPFKC  C  ++ +   L +H   HT +K + C  CGK F++   L  H+  HS D+P++C VCGKAF ++  LT H ++HT EKP+ C  CGK F    TL  HL IHT +K ++C  CGKA S      RH
Sbjct:   39 TREKPFECNECGKAFSQKQYVIKHQNTHTGE-KLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKAFSQKSHHIRH 286          

HSP 2 Score: 226.868 bits (577), Expect = 1.783e-71
Identity = 113/252 (44.84%), Postives = 156/252 (61.90%), Query Frame = 0
Query:  163 SKESNFECRVCGKSFTRKSSRTQHENGHNREPKVFKCQECGKELASKSKLNIHIKTHTGEKPFECQECGKELASKSKLNIHIKTHTGEKPFECQECGKRFVRKDNLKDHVKLHSDDKPFKCKICIKSYVRNYDLKRHMATHTDDKSFYCELCGKGFAEENHLQDHIARHSMDRPFKCQVCGKAFPRNYDLTKHSKTHTDEKPFKCELCGKEFRNSDTLRNHLIIHTDEKAFECDVCGKALSNLRTLKRHIQM 414
            S E+ F C+VCGK F+ KS+ T+HE+ H RE K F+C ECGK  + K  +  H  THTGEK FEC ECGK  + K  L  H K HTGEKPFEC++CGK F++K NL  H + H+ +KPF CK C K++    +L  H   H  +K F C  CG  F ++ +L  H   H+ ++P++C  CGKAF +   L  H + H+ +KP++C +CGK F  S +L  H+  HT EK + C+ CGKA S   TL  H+++
Sbjct:   11 SGENPFACKVCGKVFSHKSNLTEHEHFHTRE-KPFECNECGKAFSQKQYVIKHQNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGEKPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRI 261          

HSP 3 Score: 187.578 bits (475), Expect = 2.152e-56
Identity = 97/230 (42.17%), Postives = 135/230 (58.70%), Query Frame = 0
Query:  159 QIEESKESNFECRVCGKSFTRKSSRTQHENGHNREPKVFKCQECGKELASKSKLNIHIKTHTGEKPFECQECGKELASKSKLNIHIKTHTGEKPFECQECGKRFVRKDNLKDHVKLHSDDKPFKCKICIKSYVRNYDLKRHMATHTDDKSFYCELCGKGFAEENHLQDHIARHSMDRPFKCQVCGKAFPRNYDLTKHSKTHTDEKPFKCELCGKEFRNSDTLRNHLIIHT 388
            Q   + E  FEC  CGKSF++K +   H+  H  E K F+C++CGK    KS L  H +THTGEKPF C+ECGK  + KS L  H K H GEKPF+C ECG  F +K  L  H  +H+ +KP++C  C K++ +   L  H+  H+ DK + C +CGK F++ + L  H+  H+ ++P+ C  CGKAF +   L  H + HT +KP++C  CGK F        H  IHT
Sbjct:   63 QNTHTGEKLFECNECGKSFSQKENLLTHQKIHTGE-KPFECKDCGKAFIQKSNLIRHQRTHTGEKPFVCKECGKTFSGKSNLTEHEKIHIGEKPFKCSECGTAFGQKKYLIKHQNIHTGEKPYECNECGKAFSQRTSLIVHVRIHSGDKPYECNVCGKAFSQSSSLTVHVRSHTGEKPYGCNECGKAFSQFSTLALHLRIHTGKKPYQCSECGKAFSQKSHHIRHQKIHT 291          
The following BLAST results are available for this feature:
BLAST of TCONS_00049346-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OZF1.295e-7347.39Zinc finger protein OZF OS=Homo sapiens GN=ZNF146 ... [more]
back to top