TCONS_00047284-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00047284-protein
Unique Name	TCONS_00047284-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	514

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00047284-protein ID=TCONS_00047284-protein|Name=TCONS_00047284-protein|organism=Clytia hemisphaerica|type=polypeptide|length=514bp
MSSDDDEKDPLIAGSEGINYDSTISKYTRTPSVESYILTDKERKRSIRVI
YANAFIGSISFSIVMASLWPFLQKLDHEVSESFLGWVNAGYSFAQMVSGI
FMGYWCEKRNAKEPIFVSIILLAGGSLLYSYAETFGKKGIWVVLGGRVLL
GTSAGVVAVSRAVGAQLSTLEERSGVMAQLALWQAIGFSIGPAFQAMAKP
IGSNEYEIKAIKMYINVFTLPGFFMIILSIINFVLVALYFKENVHAKEKM
KKESRRLRRQSTSFEPLDTTIVFTCLLLWFIALSIFALNETILSPVVMNE
YAWTRKQTVFNTSILLSVAGVIAIICFLAIAPLEKKFGGKNVLAFGYFLM
LVGFVIYLPWGPGYPKLTHEVLNFQNGTQVVNEVVEGDGGCPYHYDWCRN
TPKLHFAQFLTAATLVGIGYPIAAVLLSTLYSKVIGPFPQGKYMGWLTGT
GSLARVVGPIYVTAVYQKGGIRWTSVSICLLLTITMCIFAFFWKRLVPYN
ERFRTKSRLSSVTA

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_030121	XLOC_030121	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00047284	TCONS_00047284	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011701	MFS
IPR020846	MFS_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1250.20		coord: 38..258 e-value: 6.7E-22 score: 77.3
None	No IPR available	GENE3D	1.20.1250.20		coord: 267..508 e-value: 3.3E-20 score: 71.7
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 53..363 e-value: 6.1E-31 score: 107.5
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 46..501 score: 12.93
IPR020846	Major facilitator superfamily domain	CDD	cd06174	MFS	coord: 47..493 e-value: 1.25277E-21 score: 93.9176
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 407..497 coord: 41..364

Blast

[Close]

BLAST of TCONS_00047284-protein vs. Swiss-Prot (Human)
Match: MFSD8 (Major facilitator superfamily domain-containing protein 8 OS=Homo sapiens GN=MFSD8 PE=1 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 1.242e-106
Identity = 189/520 (36.35%), Postives = 288/520 (55.38%), Query Frame = 0

Query:    4 DDDEKDPLIAGSEGINYDSTISKYTRTPSVESYILTDKERKRSIRVIYANAFIGSISFSIVMASLWPFLQKLDHEVSESFLGWVNAGYSFAQMVSGIFMGYWCEKRNAKEPIFVSIILLAGGSLLYSYAETFGKKGIWVVLGGRVLLGTSAGVVAVSRAVGAQLSTLEERSGVMAQLALWQAIGFSIGPAFQAMAKPIGSNEYEIKAIKMYINVFTLPGFFMIILSIINFVLVALYFKENVHAKEKMKKESRRLRRQSTSFEP-------LDTTIVFTCLLLWFIALSIFALNETILSPVVMNEYAWTRKQTVFNTSILLSVAGVIAIICFLAIAPLEKKFGGKNVLAFGYFLMLVGFVIYLPWGPGYPKLTHEVL-NFQNGTQVVNEVV--------EGDG----GCPYHYDWCRNTPKLHFAQFLTAATLVGIGYPIAAVLLSTLYSKVIGPFPQGKYMGWLTGTGSLARVVGPIYVTAVYQKGGIRWTSVSICLLLTITMCIFAFFWKRLVPYNERF 503
            ++ E++PL+  + G        ++    + E Y    K R RSIR++Y   F+ S+ FS+VM S+WP+LQK+D     SFLGWV A YS  QMV+    G W   R  KEP+ VSI++    + LY+Y         + +L  R LLG  AG VAV R+  A  ++L+ER+  MA +++ QA+GF +GP FQ     +G        IK+ IN++T P      L I+N +L+    +E  H  +   ++ + +  +  S +        +D   V    +L+F+ L IFAL ETI++P+ M+ YAWT++Q V    I+L+  GV A++ FL +  L KK G + +L  G  ++ VGF I LPWG  +PK+  E L N         E++        E D     GC     WC  TP +H AQFLT+A L+G+GYP+  ++  TLYSK++GP PQG YMGWLT +GS AR++GP++++ VY   G RW    +C ++ +T+ +    +KRL+  + R+
Sbjct:    6 NESEQEPLLGDTPGSR------EWDILETEEHY----KSRWRSIRILYLTMFLSSVGFSVVMMSIWPYLQKIDPTADTSFLGWVIASYSLGQMVASPIFGLWSNYRPRKEPLIVSILISVAANCLYAYLHIPASHNKYYMLVARGLLGIGAGNVAVVRSYTAGATSLQERTSSMANISMCQALGFILGPVFQTCFTFLGEKGVTWDVIKLQINMYTTPVLLSAFLGILNIILILAILRE--HRVDDSGRQCKSINFEEASTDEAQVPQGNIDQVAVVAINVLFFVTLFIFALFETIITPLTMDMYAWTQEQAVLYNGIILAALGVEAVVIFLGVKLLSKKIGERAILLGGLIVVWVGFFILLPWGNQFPKIQWEDLHNNSIPNTTFGEIIIGLWKSPMEDDNERPTGCSIEQAWCLYTPVIHLAQFLTSAVLIGLGYPVCNLMSYTLYSKILGPKPQGVYMGWLTASGSGARILGPMFISQVYAHWGPRWAFSLVCGIIVLTITLLGVVYKRLIALSVRY 513

The following BLAST results are available for this feature:

BLAST of TCONS_00047284-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00047284-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MFSD8	1.242e-106	36.35	Major facilitator superfamily domain-containing pr...	[more]

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TCONS_00047284-protein (polypeptide) - C. hemisphaerica