TCONS_00046531-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046531-protein
Unique NameTCONS_00046531-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046531-protein ID=TCONS_00046531-protein|Name=TCONS_00046531-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
KRSPKVMAACRNRFSKKILVALGVLVILCVGCPFFAFLNVGSPDDSPLAS
TCSSVWRWECQDKSSITNETRLPRCVKVHVDSASNEATSLNKCKLTCGNS
SMLFPKPSGTTLIGKDTVSFFPSTALKLKSYTCQGKPCSGQVKWLITNAF
IELQNTLDLTLKEQENKNHQGSHQCYRETTDRQINVDIQMATEEEKLTLD
TDEGYRLTMTSTSDDVIQVNIKATNFFGARHALETLSQLSAYDDESNGLQ
IISSADITDKPSYPYRGLLLDTSRNYFSVANIKRLIKALSFNKMNTLHWH
ITDTHSFPIEIKSVPELQQYGAYDHNKVYSQSDVREIMEYASYHGVRVLP
EFDEPAHCGEGWQYGEKAGLGKLAVCVNREPWQQYCVEPPCGQLNPTNDX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029699XLOC_029699Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046531TCONS_00046531Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025705Beta_hexosaminidase_sua/sub
IPR015883Glyco_hydro_20_cat
IPR029019HEX_eukaryotic_N
IPR029018Chitobiase/Hex_dom_2-like
IPR017853Glycoside_hydrolase_SF
Vocabulary: Molecular Function
TermDefinition
GO:0004563beta-N-acetylhexosaminidase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004563 beta-N-acetylhexosaminidase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025705Beta-hexosaminidasePRINTSPR00738GLHYDRLASE20coord: 257..274
score: 56.31
coord: 286..307
score: 46.28
coord: 340..357
score: 54.55
coord: 219..239
score: 42.86
NoneNo IPR availableGENE3D3.20.20.80coord: 252..400
e-value: 5.5E-50
score: 169.8
NoneNo IPR availableGENE3D3.30.379.10coord: 97..251
e-value: 5.6E-19
score: 68.4
IPR015883Glycoside hydrolase family 20, catalytic domainPFAMPF00728Glyco_hydro_20coord: 263..399
e-value: 1.7E-44
score: 152.6
IPR029019Beta-hexosaminidase, eukaryotic type, N-terminalPFAMPF14845Glycohydro_20b2coord: 103..239
e-value: 1.8E-14
score: 54.5
IPR029018Chitobiase/beta-hexosaminidase domain 2-likeSUPERFAMILY55545beta-N-acetylhexosaminidase-like domaincoord: 103..261
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 263..399

Blast
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BLAST of TCONS_00046531-protein vs. Swiss-Prot (Human)
Match: HEXB (Beta-hexosaminidase subunit beta OS=Homo sapiens GN=HEXB PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 8.140e-36
Identity = 83/215 (38.60%), Postives = 120/215 (55.81%), Query Frame = 0 
Query:  167 KNHQGSHQCYRETTDRQINVDIQMATEEEKL-TLDTDEGYRLTMTSTSDDVIQVNIKATNFFGARHALETLSQLSAYDDESNGLQIISSADITDKPSYPYRGLLLDTSRNYFSVANIKRLIKALSFNKMNTLHWHITDTHSFPIEIKSVPELQQYGAYDHNKVYSQSDVREIMEYASYHGVRVLPEFDEPAHCGEGWQYGEKAGLGKLAVCVNRE 380
            K H    +   +T  +Q+ V I + +E +    + +DE Y L +     + + V +KA   +GA   LET SQL  Y D S G   I+ + I D P + +RG+L+DTSR+Y  V  I + + A++FNK N LHWHI D  SFP +  + PEL   G+Y  + VY+ +DVR ++EYA   G+RVLPEFD P H    W  G+K     L  C +R+
Sbjct:  110 KWHHEPAEFQAKTQVQQLLVSITLQSECDAFPNISSDESYTLLV----KEPVAV-LKANRVWGALRGLETFSQL-VYQD-SYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKFNVLHWHIVDDQSFPYQSITFPELSNKGSYSLSHVYTPNDVRMVIEYARLRGIRVLPEFDTPGHT-LSWGKGQK---DLLTPCYSRQ 313
The following BLAST results are available for this feature:
BLAST of TCONS_00046531-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HEXB8.140e-3638.60Beta-hexosaminidase subunit beta OS=Homo sapiens G... [more]
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