TCONS_00046285-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046285-protein
Unique NameTCONS_00046285-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length556

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046285-protein ID=TCONS_00046285-protein|Name=TCONS_00046285-protein|organism=Clytia hemisphaerica|type=polypeptide|length=556bp
MSGLNVIKSPIYEWSKAFGEKNIGEVSTTANDKADGNDSEDPIPSISKAI
ADSFQTRPLGIATPTKNTSGFLKENRMKPLYEEFCKLEVNEDVHRHHTPQ
KEHQHGIHEASQSTEDGCDSPLRRFMGQYPPDVADYLKNLNSSFKNSRFI
KTLTPTKFIDSLAKLRDSDGDEQVESNSGNGDFYPNSMLAGNPDGFISSP
SVLEKFIEGATTTTTTTTDDNGKQENLFTQSTGKYFDEVLGSSQNNNWPN
VLPANVLPPVTMSSYEEILNFQQELLQLNNNNNGNAKEGSSNEQLVFPIY
FQPMTVTQDESPTDQTNPIPNGPKLQHPNPGFDEKAMASMSGLPYDEDFI
QRCRQACLDTEEYMNGGDPQSDSMKYLEEAAVRLLLNSVNNGIKRPRTYR
RRNNEEAPQYQCQYCGKEFTRMFTLQTHQRVHSGDKPYVCEICGKAFRQS
GTKLNHMRAVHAKEKPYKCDFCPKSFGHKSSLTVHRRIHTNEKPYTCEIC
GRRFTDRATMKKHMPTHTKEKNHQCEYCGKRLTQHSNLKRHILTVHINKK
TKAPKE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029554XLOC_029554Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046285TCONS_00046285Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 523..546
e-value: 0.0048
score: 26.1
coord: 438..461
e-value: 8.9E-4
score: 28.6
coord: 495..517
e-value: 3.4E-4
score: 29.9
coord: 410..432
e-value: 2.9E-4
score: 30.2
coord: 467..489
e-value: 3.3E-4
score: 30.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 469..489
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 497..517
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 440..461
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 525..546
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 412..432
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 523..551
score: 12.071
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 467..494
score: 16.29
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 495..522
score: 14.004
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 410..437
score: 16.872
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 438..466
score: 14.565
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 434..495
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 489..541
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 408..456
NoneNo IPR availableGENE3D3.30.160.60coord: 532..551
e-value: 2.3E-4
score: 20.7
NoneNo IPR availableGENE3D3.30.160.60coord: 475..485
e-value: 3.6E-8
score: 33.1
NoneNo IPR availableGENE3D3.30.160.60coord: 486..507
e-value: 3.2E-18
score: 65.0
NoneNo IPR availableGENE3D3.30.160.60coord: 445..458
e-value: 1.7E-10
score: 40.1
NoneNo IPR availableGENE3D3.30.160.60coord: 508..531
e-value: 3.7E-16
score: 58.7
NoneNo IPR availableGENE3D2.20.28.30coord: 422..444
e-value: 5.3E-17
score: 61.4
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 523..546
e-value: 9.8E-5
score: 22.5
coord: 410..432
e-value: 4.0E-5
score: 23.7
coord: 467..489
e-value: 1.1E-4
score: 22.4
coord: 438..461
e-value: 8.8E-4
score: 19.5
coord: 495..517
e-value: 4.6E-4
score: 20.4
NoneNo IPR availableGENE3D2.30.30.380coord: 459..474
e-value: 3.3E-7
score: 29.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..116
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 86..421
e-value: 1.1E-9
score: 38.0

Blast
BLAST of TCONS_00046285-protein vs. Swiss-Prot (Human)
Match: ZN679 (Zinc finger protein 679 OS=Homo sapiens GN=ZNF679 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 7.768e-38
Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 0
Query:  399 YRRRNNEEAPQYQCQYCGKEFTRMFTLQTHQRVHSGDKPYVCEICGKAFRQSGTKLNHMRAVHAKEKPYKCDFCPKSFGHKSSLTVHRRIHTNEKPYTCEICGRRFTDRATMKKHMPTHTKEKNHQCEYCGKRLTQHSNLKRH 541
            ++R +  E P Y+C+ CGK FT   TL  H+R+H+G+KPY CE CG+AF +S T  NH R +H  EKPY C+ C K+F   SSLT H+RIHT EKPYTCE CG+ F   +T+KKH   HT EK ++C+ CGK     S L  H
Sbjct:  230 HKRIHTGEKP-YRCEECGKAFTWSSTLTKHRRIHTGEKPYTCEECGQAFSRSSTLANHKR-IHTGEKPYTCEECGKAFSLSSSLTYHKRIHTGEKPYTCEECGKAFNCSSTLKKHKIIHTGEKPYKCKECGKAFAFSSTLNTH 370          

HSP 2 Score: 124.02 bits (310), Expect = 8.593e-31
Identity = 64/143 (44.76%), Postives = 87/143 (60.84%), Query Frame = 0
Query:  399 YRRRNNEEAPQYQCQYCGKEFTRMFTLQTHQRVHSGDKPYVCEICGKAFRQSGTKLNHMRAVHAKEKPYKCDFCPKSFGHKSSLTVHRRIHTNEKPYTCEICGRRFTDRATMKKHMPTHTKEKNHQCEYCGKRLTQHSNLKRH 541
            +RR +  E P Y C+ CG+ F+R  TL  H+R+H+G+KPY CE CGKAF  S +   H R +H  EKPY C+ C K+F   S+L  H+ IHT EKPY C+ CG+ F   +T+  H   HT E+ ++CE C K     S+L  H
Sbjct:  258 HRRIHTGEKP-YTCEECGQAFSRSSTLANHKRIHTGEKPYTCEECGKAFSLSSSLTYHKR-IHTGEKPYTCEECGKAFNCSSTLKKHKIIHTGEKPYKCKECGKAFAFSSTLNTHKRIHTGEEPYKCEECDKAFKWSSSLANH 398          

HSP 3 Score: 117.857 bits (294), Expect = 1.336e-28
Identity = 61/133 (45.86%), Postives = 80/133 (60.15%), Query Frame = 0
Query:  409 QYQCQYCGKEFTRMFTLQTHQRVHSGDKPYVCEICGKAFRQSGTKLNHMRAVHAKEKPYKCDFCPKSFGHKSSLTVHRRIHTNEKPYTCEICGRRFTDRATMKKHMPTHTKEKNHQCEYCGKRLTQHSNLKRH 541
             ++C+  GK F  +  L  HQ +H+ +  Y CE CGK F  S T   H R +H  EKPY+C+ C K+F   S+LT HRRIHT EKPYTCE CG+ F+  +T+  H   HT EK + CE CGK  +  S+L  H
Sbjct:  183 HFKCKKYGKSFCMVSQLHQHQIIHTRENSYQCEECGKPFNCSSTLSKHKR-IHTGEKPYRCEECGKAFTWSSTLTKHRRIHTGEKPYTCEECGQAFSRSSTLANHKRIHTGEKPYTCEECGKAFSLSSSLTYH 314          

HSP 4 Score: 117.087 bits (292), Expect = 2.410e-28
Identity = 58/128 (45.31%), Postives = 80/128 (62.50%), Query Frame = 0
Query:  399 YRRRNNEEAPQYQCQYCGKEFTRMFTLQTHQRVHSGDKPYVCEICGKAFRQSGTKLNHMRAVHAKEKPYKCDFCPKSFGHKSSLTVHRRIHTNEKPYTCEICGRRFTDRATMKKHMPTHTKEKNHQCE 526
            ++R +  E P Y C+ CGK F+   +L  H+R+H+G+KPY CE CGKAF  S T   H + +H  EKPYKC  C K+F   S+L  H+RIHT E+PY CE C + F   +++  H   HT EK ++CE
Sbjct:  286 HKRIHTGEKP-YTCEECGKAFSLSSSLTYHKRIHTGEKPYTCEECGKAFNCSSTLKKH-KIIHTGEKPYKCKECGKAFAFSSTLNTHKRIHTGEEPYKCEECDKAFKWSSSLANHKSMHTGEKPYKCE 411          

HSP 5 Score: 95.5153 bits (236), Expect = 4.604e-21
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 0
Query:  398 TYRRRNNEEAPQYQCQYCGKEFTRMFTLQTHQRVHSGDKPYVCEICGKAFRQSGTKLNHMRAVHAKEKPYKCDFCPKSFGHKSSLTVHRRIHTNEKPYTCE 498
            TY +R +     Y C+ CGK F    TL+ H+ +H+G+KPY C+ CGKAF  S T LN  + +H  E+PYKC+ C K+F   SSL  H+ +HT EKPY CE
Sbjct:  312 TYHKRIHTGEKPYTCEECGKAFNCSSTLKKHKIIHTGEKPYKCKECGKAFAFSST-LNTHKRIHTGEEPYKCEECDKAFKWSSSLANHKSMHTGEKPYKCE 411          
The following BLAST results are available for this feature:
BLAST of TCONS_00046285-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN6797.768e-3851.05Zinc finger protein 679 OS=Homo sapiens GN=ZNF679 ... [more]
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