TCONS_00045937-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045937-protein
Unique NameTCONS_00045937-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length496

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045937-protein ID=TCONS_00045937-protein|Name=TCONS_00045937-protein|organism=Clytia hemisphaerica|type=polypeptide|length=496bp
MNRSRPFKFSVSPPNTNTKATTLGRKQQLAQSKLKNVLDVRVIPGHPQQA
WVECYDHSFDEEAQEGIAELHAHEIHKKYEKMKLDRDQKLKDFQTDVNQR
VRYLEKMKRKQMKLNTMKKEEEEQNVILQRTLGLKVPYRGTVEDLRALNK
ELLKSCIVPSEANKQLIKNEIEKSNRLLTNTCSQVSHDSSNARKSMLTKK
ISVNTDPISPSRSMKIFPRKSPILNKPLADEWTGSFEIKRYDGQNSAVIT
ENAGLEVGVEKDTGNEFGYDQRGEENMEEEGINGTDSAIMIEEKCHFEDD
TGVSSLHRDLVMKMCNNSNHGVLNDWKQNPKGGQYWNYRKIFMEIEREQV
QEHRRKQEHRKRILRLKIEKEREREIKEGEISQFPEVTVVNTTADCDRLN
NTNAKGVAVTPNKLKTDQQEDKENEEDETELYRYIDALRQTSKERTRING
VFLPPLCPCGPSIWDTHPESCANNCVFYKNPKGYIRALTTVLANNR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029360XLOC_029360Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045937TCONS_00045937Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 100..124
NoneNo IPR availableCOILSCoilCoilcoord: 354..376
NoneNo IPR availableGENE3D3.40.50.300coord: 127..447
e-value: 0.026
score: 13.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Blast
[Close]
BLAST of TCONS_00045937-protein vs. Swiss-Prot (Human)
Match: CCD15 (Coiled-coil domain-containing protein 15 OS=Homo sapiens GN=CCDC15 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.878e-21
Identity = 59/177 (33.33%), Postives = 87/177 (49.15%), Query Frame = 0 
Query:  334 QYWNYRKIFMEIEREQVQEHR---------------RKQE---HRKRILRLKIEKEREREIKEGEISQFPEVTVVNTTADCDRLNNTNAKGVAVTPNKLKTDQQEDKENEEDETELYRYIDALRQTSKERTRINGVFLPPLCPCGPSIWDTHPESCANNCVFYKNPKGYIRALTTVL 492
            QY  +R++FM+IEREQV+E +               R+QE     +RILR+   ++     K  EI                +L     KG               +E ++ E E  RY++ALR   +E+ ++  + LPPLC CGP  WD HP++CANNC+FYKN + Y RAL + +
Sbjct:  773 QYLRHRRLFMDIEREQVKEQQRQKEQKKKIEKIKKKREQECYAAEQRILRMNFHEDPYSGEKLSEI--------------LAQLQLQEIKGT--------------REKQQREKEYLRYVEALRAQIQEKMQLYNITLPPLCCCGPDFWDAHPDTCANNCIFYKNHRAYTRALHSFI 921
The following BLAST results are available for this feature:
BLAST of TCONS_00045937-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CCD152.878e-2133.33Coiled-coil domain-containing protein 15 OS=Homo s... [more]
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