TCONS_00045870-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00045870-protein
Unique Name	TCONS_00045870-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	581

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00045870-protein ID=TCONS_00045870-protein|Name=TCONS_00045870-protein|organism=Clytia hemisphaerica|type=polypeptide|length=581bp
TLFHNKKRNTNNKVMTSYGTTNSINDGPDDHQDLGDLPHENTPLLHTDSF
EEQTNTPVKNIEITPSTRRYMYRDPNQPKRERNYSQYSTASSRTRVGSLI
SSVTHTISTSVRKLQKSVGFLQGFTLIVGILIGSGVFISPSLVMQSTHDA
GISFVLWFACGLIALGGSLCYVELGCAIKRAGGNYAYIQEAYGDLPAFLC
CWTVAFIVDPAGVAAITLTLGTYVIKPFEEWIEPNPWYPKCIAAGVILMI
ALVNCWSVRAATRAQTLFTFAQILSVVFVVCIGIWQLAKEGTGHITHGMF
NVTSFTFKDVGPLGAALYNGLWAYDGWALVSNVTEEMTNLERNLFLSIIT
GIPFVICCYLLVNLSFLAALSVEQIANSPAVAVTFIDKTLGHNAAFAMPI
LVALSCYGAANGTVFACGRLSLAAGREGHLPELLSMIHKKRHTPIPAVIM
TSIISLVMLIPDASGLETLISFFNFSCWFIYGLSLFAVVVLRIRQPDLHR
PYKVWIITPILMTLISLFLVIVPFLQNPINPLIASGMIAMGIPFYFVFVY
FEPKHPTALIAARRRFKKRTQKLFNLAPCTM

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_029313	XLOC_029313	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00045870	TCONS_00045870	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002293	AA/rel_permease1

Vocabulary: **Molecular Function**
Term	Definition
GO:0015171	amino acid transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0003333	amino acid transmembrane transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0003333	amino acid transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0015171	amino acid transmembrane transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002293	Amino acid/polyamine transporter I	PFAM	PF13520	AA_permease_2	coord: 119..543 e-value: 5.8E-60 score: 203.2
IPR002293	Amino acid/polyamine transporter I	PIRSF	PIRSF006060	AA_transporter	coord: 93..573 e-value: 1.6E-73 score: 245.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..90

Blast

[Close]

BLAST of TCONS_00045870-protein vs. Swiss-Prot (Human)
Match: BAT1 (b(0,+)-type amino acid transporter 1 OS=Homo sapiens GN=SLC7A9 PE=1 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 9.052e-113
Identity = 181/441 (41.04%), Postives = 271/441 (61.45%), Query Frame = 0

Query:  113 KLQKSVGFLQGFTLIVGILIGSGVFISPSLVMQSTHDAGISFVLWFACGLIALGGSLCYVELGCAIKRAGGNYAYIQEAYGDLPAFLCCWTVAFIVDPAGVAAITLTLGTYVIKPFEEWIEPNPWYPKCIAAGVILMIALVNCWSVRAATRAQTLFTFAQILSVVFVVCIGIWQLAKEGTGHITHGMFNVTSFTFKDVGPLGAALYNGLWAYDGWALVSNVTEEMTNLERNLFLSIITGIPFVICCYLLVNLSFLAALSVEQIANSPAVAVTFIDKTLGHNAAFAMPILVALSCYGAANGTVFACGRLSLAAGREGHLPELLSMIHKKRHTPIPAVIMTSIISLVMLIPDASGLETLISFFNFSCWFIYGLSLFAVVVLRIRQPDLHRPYKVWIITPILMTLISLFLVIVPFLQNPI-NPLIASGMIAMGIPFYFVFVYFE 552
             LQK +G + G ++IVG +IGSG+F+SP  V+ +T   G   ++W ACG++A  G+LC+ ELG  I ++GG Y Y+ EAYG +PA+L  W    ++ P   A I L+   YV  PF    +P     KC+AA  IL I+ VN  SVR  +  Q +FT A+++ V  ++  G+  LA+  T +  +            VG +  A YNGLWAYDGW  ++ +TEE+ N  RNL L+II GIP V  CY+L+N+S+   ++  ++  S AVAVTF D+ L + A++ +P+ VA S  GAANGT F  GRL   AGREGH+ ++LS I  +R TP PA+I   II+ + +IP    + +L+++F+F+ W  YGL++  ++V+R  + +L RP KV ++ P+LMTLIS+FLV+ P +  P    L     I  G+ FYF+FV+++
Sbjct:   25 SLQKELGLISGISIIVGTIIGSGIFVSPKSVLSNTEAVGPCLIIWAACGVLATLGALCFAELGTMITKSGGEYPYLMEAYGPIPAYLFSWASLIVIKPTSFAIICLSFSEYVCAPFYVGCKPPQIVVKCLAAAAILFISTVNSLSVRLGSYVQNIFTAAKLVIVAIIIISGLVLLAQGNTKNFDNSFEGAQ----LSVGAISLAFYNGLWAYDGWNQLNYITEELRNPYRNLPLAIIIGIPLVTACYILMNVSYFTVMTATELLQSQAVAVTFGDRVL-YPASWIVPLFVAFSTIGAANGTCFTAGRLIYVAGREGHMLKVLSYISVRRLTPAPAIIFYGIIATIYIIP--GDINSLVNYFSFAAWLFYGLTILGLIVMRFTRKELERPIKVPVVIPVLMTLISVFLVLAPIISKPTWEYLYCVLFILSGLLFYFLFVHYK 458

The following BLAST results are available for this feature:

BLAST of TCONS_00045870-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00045870-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BAT1	9.052e-113	41.04	b(0,+)-type amino acid transporter 1 OS=Homo sapie...	[more]

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TCONS_00045870-protein (polypeptide) - C. hemisphaerica