TCONS_00045809-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045809-protein
Unique NameTCONS_00045809-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length203

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045809-protein ID=TCONS_00045809-protein|Name=TCONS_00045809-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MATSTQHHLEPLDPFWPPFDPTFRNQTHLHKPRQPPQTTDCGTCTIQSSF
ARMSISNSQNRNSAPTVIPPSYYVPVYIPSDYQSSSFYSTPSSSPPLHPP
TLPTIPPPKYLNTPPVSPPRINYSKKPLSSKTDDSEPVILTRSHVNPDTV
SESYTLATLFRNKIFVGSLNQTITAGDLVDFFQKFGVVTEAKVVMDDKGS
SRG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029282XLOC_029282Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045809TCONS_00045809Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 164..203
e-value: 2.1E-7
score: 30.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 162..203
score: 10.752
IPR000504RNA recognition motif domainSUPERFAMILY54928RNA-binding domain, RBDcoord: 156..203
NoneNo IPR availableGENE3D3.30.70.330coord: 158..203
e-value: 3.6E-9
score: 36.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..135

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045809-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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