TCONS_00045769-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045769-protein
Unique NameTCONS_00045769-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length581

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045769-protein ID=TCONS_00045769-protein|Name=TCONS_00045769-protein|organism=Clytia hemisphaerica|type=polypeptide|length=581bp
MVRRRKSQNFSPKNVELYKKSTNGYNLRQIVSKNTPLNNKYKEWERTLKK
IAKRSFTKVTKNKYTGISKKLKRIMHERRKHIKDKGDNETIRTLNEEIEE
TMQKEHADEGQKIAERITKEGGVNNPGFWKVLKQKKSENDRAVAMKTKQG
VMQTGKEEIKEVYKQHYKELLQTIPADDDEGKQAEKEVDRNFNLLRKTSK
NAETKEITAKEIEIALKKLKSKKAADEGGVRAEYFMYGGEDLKISLLNIL
NEILKEGTIPEKWKKMRIKSIYKNKGSRNEMKNQRGIFITNVVSKIFERV
LLNRNRELIESSMSPFQCGGRKKRGIADHLFTLKRMIESYKEKRKVLYVF
YGDLEKCFDKLWLKDSIIELWKTGMNPKEIMLVYNMNKTCLITIDTPLGK
TEEIEVKEIVRQGTIWGPTLCSITTDKVNNVAERVFSKYEEAEVEPMVYV
DDICATGDEENIISAVKNCHRLEKTKKMTFNNEKSNYQAIGGTKKNKKMI
QLKVKKGNIKRCEKYKYLGEVINEKGDLEDTIRKKGSKARGITLAIQKLS
NKAGYFRNSVAEKLIKTTLLPVLTYGTETWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029247XLOC_029247Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045769TCONS_00045769Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 202..222
NoneNo IPR availableGENE3D3.30.70.270coord: 247..522
e-value: 2.3E-10
score: 39.9
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 265..519
e-value: 7.43616E-33
score: 124.326
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 204..485
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 276..519
e-value: 3.2E-23
score: 82.3
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 252..522
score: 12.114

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00045769-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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