TCONS_00045717-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045717-protein
Unique NameTCONS_00045717-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length304

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045717-protein ID=TCONS_00045717-protein|Name=TCONS_00045717-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
MFQDQEKKTLIIAGTVAVSVGILTYLWKRWVSGDKVTKIALNPQQKIPFK
LIEKHIISHDTRRFRFALQTPEHVLGLPVGKHMYLSAHIDGKLVIRPYTP
VTSDDELGYFDLVIKVYFKNVHPKFPEGGKMSQHLESMEIGDTIDVRGPS
GHYTYKGQGVFEVEENRKEKKIMRCKKIGMIAGGTGITPMLQVVNDILKH
PEDKTEVSLLFANQTEEDILLREEIEGMVEENPGRLHVWYTLDRAQENWS
YSSGFVNEEMIKEHLPRSDDHSVILMCGPPPMIKFACIPNLEKLGFKPDQ
YFSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029218XLOC_029218Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045717TCONS_00045717Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001709Flavoprot_Pyr_Nucl_cyt_Rdtase
IPR001834NADH-Cyt_B5_reductase
IPR001433OxRdtase_FAD/NAD-bd
IPR008333OxRdtase_FAD-bd_dom
IPR017927Fd_Rdtase_FAD-bd
IPR017938Riboflavin_synthase-like_b-brl
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001709Flavoprotein pyridine nucleotide cytochrome reductasePRINTSPR00371FPNCRcoord: 273..281
score: 38.19
coord: 179..198
score: 40.75
coord: 205..214
score: 25.52
coord: 217..228
score: 41.09
coord: 249..265
score: 21.43
coord: 96..103
score: 39.8
IPR001834NADH:cytochrome b5 reductase (CBR)PRINTSPR00406CYTB5RDTASEcoord: 217..228
score: 53.12
coord: 273..281
score: 60.42
coord: 96..103
score: 55.47
coord: 179..198
score: 62.29
coord: 75..86
score: 64.06
coord: 141..155
score: 50.0
NoneNo IPR availableGENE3D3.40.50.80coord: 151..303
e-value: 4.7E-42
score: 142.8
NoneNo IPR availableGENE3D2.40.30.10coord: 34..150
e-value: 6.2E-27
score: 93.3
NoneNo IPR availableCDDcd06183cyt_b5_reduct_likecoord: 49..304
e-value: 3.17392E-123
score: 354.18
NoneNo IPR availableSUPERFAMILY52343Ferredoxin reductase-like, C-terminal NADP-linked domaincoord: 142..303
IPR001433Oxidoreductase FAD/NAD(P)-bindingPFAMPF00175NAD_binding_1coord: 180..287
e-value: 1.0E-35
score: 122.6
IPR008333Oxidoreductase, FAD-binding domainPFAMPF00970FAD_binding_6coord: 49..155
e-value: 3.9E-35
score: 120.1
IPR017927Ferredoxin reductase-type FAD-binding domainPROSITEPS51384FAD_FRcoord: 44..156
score: 16.164
IPR017938Riboflavin synthase-like beta-barrelSUPERFAMILY63380Riboflavin synthase domain-likecoord: 38..157

Blast
[Close]
BLAST of TCONS_00045717-protein vs. Swiss-Prot (Human)
Match: NB5R3 (NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=CYB5R3 PE=1 SV=3)

HSP 1 Score: 353.599 bits (906), Expect = 7.197e-123
Identity = 161/264 (60.98%), Postives = 208/264 (78.79%), Query Frame = 0 
Query:   42 NPQQKIPFKLIEKHIISHDTRRFRFALQTPEHVLGLPVGKHMYLSAHIDGKLVIRPYTPVTSDDELGYFDLVIKVYFKNVHPKFPEGGKMSQHLESMEIGDTIDVRGPSGHYTYKGQGVFEVEENRKEKKIMR-CKKIGMIAGGTGITPMLQVVNDILKHPEDKTEVSLLFANQTEEDILLREEIEGMVEENPGRLHVWYTLDRAQENWSYSSGFVNEEMIKEHLPRSDDHSVILMCGPPPMIKFACIPNLEKLGFKPDQYFSF 304
            +P  K P +LI++ IISHDTRRFRFAL +P+H+LGLPVG+H+YLSA IDG LV+RPYTP++SDD+ G+ DLVIKVYFK+ HPKFP GGKMSQ+LESM+IGDTI+ RGPSG   Y+G+G F +  ++K   I+R  K +GMIAGGTGITPMLQV+  I+K P+D T   LLFANQTE+DILLR E+E +  ++  R  +WYTLDRA E W Y  GFVNEEMI++HLP  ++  ++LMCGPPPMI++AC+PNL+ +G   ++ F F
Sbjct:   38 SPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF 301
The following BLAST results are available for this feature:
BLAST of TCONS_00045717-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NB5R37.197e-12360.98NADH-cytochrome b5 reductase 3 OS=Homo sapiens GN=... [more]
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