TCONS_00045585-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045585-protein
Unique NameTCONS_00045585-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length590

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045585-protein ID=TCONS_00045585-protein|Name=TCONS_00045585-protein|organism=Clytia hemisphaerica|type=polypeptide|length=590bp
MEDTFYLQEGSIEAESVDGFQYDEITVDDEFSITGTDIDEDLETALHTAQ
EKDSLNSFEEKSAVSSIVTRTRPEVTEDFVRNFLVRMNMVKTLDTFQTEW
YEFKEKGMLKEEDTSNVPDVYIRNRQLDELVNHLKDELQSFKNAGQKAKD
THLKLRKERDFHRMHHKRVVQEKDKLLNEIKRMKQHYENYEPTLKALRQK
YETAMKEKMLTKLERDRALAQIEGIQTSQAQNQNFTEKQAKQPKYVPITP
NYDIQDNFQYSSEISPTKHPKDSEFPADKGVNPMLAKQKITCPHVSRSGG
FRLTNSIQGHSLGISGFALHPRKQILATVSDDKTWKLWGLLEGELIMTGE
GHTEWLSDCHFSPSGTQLVTTSGDSTVKVWDFAEERCIVTFNDHTHAVWG
CSWHHTGDFIATCANDGISKIWDLNSLRCRTTLRGHADSVNSVQFLAYSN
TLCTCSADKTISLWDARTGLCAQTLYGHMHSVNHATFNMQGDVLASADAY
GHVYLWDIRTCSISSKIDLGPHAINKIAFDPGSSVVACASNDGLVKIYEI
ENEQVTTLTGHEDAVQTVIFDRQGEFMLSGGSDSLVKVWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029146XLOC_029146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045585TCONS_00045585Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
NoneNo IPR availableCOILSCoilCoilcoord: 124..151
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableGENE3D2.40.50.140coord: 348..379
e-value: 3.6E-13
score: 48.4
NoneNo IPR availableGENE3D1.10.10.670coord: 417..441
e-value: 1.7E-9
score: 36.9
coord: 544..590
e-value: 2.6E-11
score: 42.8
coord: 380..416
e-value: 8.6E-16
score: 57.1
NoneNo IPR availableGENE3D2.80.10.50coord: 442..477
e-value: 9.4E-16
score: 57.6
coord: 303..347
e-value: 2.1E-8
score: 33.9
NoneNo IPR availableCDDcd00200WD40coord: 303..590
e-value: 4.59993E-77
score: 247.248
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 452..466
score: 38.97
coord: 577..590
score: 30.46
coord: 368..382
score: 37.87
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 426..465
e-value: 3.5E-9
score: 46.5
coord: 342..381
e-value: 1.2E-9
score: 48.1
coord: 551..590
e-value: 2.6E-7
score: 40.3
coord: 384..423
e-value: 3.1E-8
score: 43.4
coord: 468..507
e-value: 2.5E-4
score: 30.4
coord: 300..339
e-value: 2.7E-4
score: 30.3
coord: 510..549
e-value: 0.041
score: 23.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 304..338
e-value: 0.034
score: 14.9
coord: 522..548
e-value: 0.078
score: 13.8
coord: 554..590
e-value: 9.0E-5
score: 23.1
coord: 386..423
e-value: 3.5E-4
score: 21.2
coord: 428..465
e-value: 2.9E-7
score: 31.0
coord: 471..507
e-value: 0.0064
score: 17.2
coord: 344..381
e-value: 2.5E-5
score: 24.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 475..510
score: 10.642
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 558..590
score: 15.588
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 391..432
score: 11.979
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 349..390
score: 14.151
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 433..474
score: 13.951
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 307..348
score: 11.645
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 478..543
e-value: 2.7E-16
score: 58.9
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 452..466
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 410..424
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 368..382
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 307..590
score: 59.637
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 301..589

Blast
[Close]
BLAST of TCONS_00045585-protein vs. Swiss-Prot (Human)
Match: SPG16 (Sperm-associated antigen 16 protein OS=Homo sapiens GN=SPAG16 PE=2 SV=2)

HSP 1 Score: 520.005 bits (1338), Expect = 5.575e-179
Identity = 265/600 (44.17%), Postives = 377/600 (62.83%), Query Frame = 0 
Query:    2 EDTFYLQEGSIEAESVDGFQYDEITVDDEFSITGTDIDEDLETALHTAQEKDS-LNSFEEKSAVSSIVTRTRPEVTEDFVRNFLVRMNMVKTLDTFQTEWYEFKEKGMLKEEDTSNVPDVYIRNRQLDELVNHLKDELQSFKNAGQKAKDTHLKLRKERDFHRMHHKRVVQEKDKLLNEIKRMKQHYENYEPTLKALRQKYETAMKEKMLTKLERDRALAQIEGIQTSQAQNQNFTEKQAKQPKY-----VPITPNYDIQDNFQYSSEISPTK-----HPKDSEFPADKGVNPMLAKQKITCPHVSRSGGFRLTNSIQGHSLGISGFALHPRKQILATVSDDKTWKLWGLLEGELIMTGEGHTEWLSDCHFSPSGTQLVTTSGDSTVKVWDFAEERCIVTFNDHTHAVWGCSWHHTGDFIATCANDGISKIWDLNSLRCRTTLRGHADSVNSVQFLAYSNTLCTCSADKTISLWDARTGLCAQTLYGHMHSVNHATFNMQGDVLASADAYGHVYLWDIRTCSISSKIDLGPHAINKIAFDPGSSVVACASNDGLVKIYEIENEQVTTLTGHEDAVQTVIFDRQGEFMLSGGSDSLVKVWS 590
            E  +YL++ +I   S D ++Y+EI  DD FSI   + +EDL  A+  AQE+ +     E K+ + S      PEV EDF+ NFL++M M +TLD FQ+EWYE  +KG+ +     NVPDVY +   L+    +LK +L+ +K A  KA++  LK++KERDFHRMHHKR+VQEK+KL+N++K +K HY +YEPT++ L +K+ T +KEKMLT LERD+ + QI G+Q +  + Q        Q K          P    Q   + + E +  K     + KDSEFP D   NP L   K +         ++L N  + H L +S  ++ P K IL +  +D+ WK+ GL +  +++TG GHT+WLSDC F PSG +L T+SGD+TVK+WD  +  CI+TF  H+ AVW C+WH  G+F+A+ + D  SKIWD+NS RCR TL GH DSVNS++F  +SNTL T SADKT+S+WDARTG+C Q+LYGHMHS+N A F+ +G ++AS DA G   LWD R       ID+GP   N++ FD    V+A AS +G++ + ++++ ++  L GHE+   TV+F   GE + SGGSD  V+ WS
Sbjct:   39 EGAYYLEQVTITEASEDDYEYEEIP-DDNFSIP--EGEEDLAKAIQMAQEQATDTEILERKTVLPS--KHAVPEVIEDFLCNFLIKMGMTRTLDCFQSEWYELIQKGVTELRTVGNVPDVYTQIMLLENENKNLKKDLKHYKQAADKAREDLLKIQKERDFHRMHHKRIVQEKNKLINDLKGLKLHYASYEPTIRVLHEKHHTLLKEKMLTSLERDKVVGQISGLQETLKKLQRGHSYHGPQIKVDHSREKENAPEGPTQKGLREAREQNKCKTKMKGNTKDSEFPIDMQPNPNLNVSKESLSPAKFD--YKLKNIFRLHELPVSCVSMQPHKDILVSCGEDRLWKVLGLPKCNVLLTGFGHTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVASSSLDKTSKIWDVNSERCRCTLYGHTDSVNSIEFFPFSNTLLTSSADKTLSIWDARTGICEQSLYGHMHSINDAIFDPRGHMIASCDACGVTKLWDFRKLLPIVSIDIGPSPGNEVNFDSSGRVLAQASGNGVIHLLDLKSGEIHKLMGHENEAHTVVFSHDGEILFSGGSDGTVRTWS 631
The following BLAST results are available for this feature:
BLAST of TCONS_00045585-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SPG165.575e-17944.17Sperm-associated antigen 16 protein OS=Homo sapien... [more]
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