TCONS_00045327-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00045327-protein
Unique Name	TCONS_00045327-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	254

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00045327-protein ID=TCONS_00045327-protein|Name=TCONS_00045327-protein|organism=Clytia hemisphaerica|type=polypeptide|length=254bp
EKIKITKKKLYAMNKEIKDEQKVNSVSIKIGPEDAFLDFLGEEKHEFVDA
NIDDDIPLKIKIEEENNSLVPFEEVSDSQHQPDSFDIKIKLDEIILPTNL
TTDANNLQVENPLPKTRKNNLITKERGQSFKCKECGKAFEFNCDLKRHFR
IHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGS
LKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNC
FQRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_028908	XLOC_028908	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00045327	TCONS_00045327	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013087	Znf_C2H2_type
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 214..236 e-value: 0.012 score: 24.8 coord: 130..152 e-value: 0.017 score: 24.3 coord: 186..208 e-value: 1.6E-4 score: 31.0 coord: 158..180 e-value: 0.01 score: 25.0
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 216..236
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 160..180
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 132..152
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 188..208
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 130..157 score: 16.041
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 186..213 score: 14.939
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 158..185 score: 14.066
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 214..241 score: 14.815
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 129..180
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 167..223
IPR013087	Zinc finger C2H2-type	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 208..253
None	No IPR available	PFAM	PF00096	zf-C2H2	coord: 130..152 e-value: 5.2E-4 score: 20.2 coord: 214..236 e-value: 0.0016 score: 18.7 coord: 158..180 e-value: 5.1E-5 score: 23.4 coord: 186..208 e-value: 8.6E-7 score: 29.0
None	No IPR available	GENE3D	3.30.160.60		coord: 199..219 e-value: 3.6E-15 score: 55.6
None	No IPR available	GENE3D	3.30.160.60		coord: 239..254 e-value: 3.9E-4 score: 19.9
None	No IPR available	GENE3D	2.10.69.10		coord: 169..198 e-value: 1.1E-19 score: 69.8
None	No IPR available	GENE3D	2.20.28.30		coord: 142..168 e-value: 1.1E-18 score: 66.8
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 220..238 e-value: 6.1E-13 score: 48.1
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 73..141 e-value: 2.0E-9 score: 37.1

Blast

[Close]

BLAST of TCONS_00045327-protein vs. Swiss-Prot (Human)
Match: ZN254 (Zinc finger protein 254 OS=Homo sapiens GN=ZNF254 PE=2 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 4.851e-41
Identity = 70/128 (54.69%), Postives = 92/128 (71.88%), Query Frame = 0

Query:  126 RGQSFKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            R + +KC+ECGKAF ++  L RH R+HT E+P+ C++CGK F+QS  LT H I+H+  KP+KCEECGK F  + +L KH  +HTE+K +KCE+CGK FK +  L  HK IHT EK +KCEECG  F R
Sbjct:  458 REKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNR 585

HSP 2 Score: 137.502 bits (345), Expect = 5.710e-37
Identity = 63/124 (50.81%), Postives = 90/124 (72.58%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            +KC+ECGKAF ++  L +H RIHT E+P+ C++CGK F  S  LT+H  +H+  KP+KCEECGK+F  + +L  H  +HT +K +KCEECGK F  + +L +HK IHT+EK +KCE+CG  F++
Sbjct:  434 YKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQ 557

HSP 3 Score: 134.806 bits (338), Expect = 4.787e-36
Identity = 65/126 (51.59%), Postives = 86/126 (68.25%), Query Frame = 0

Query:  126 RGQSFKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCF 251
            R + +KC+ECGKAF ++  L RH R+HT E+P+ C++CGK F+QS  LT H I+H+  K +KC ECGK FK   +L  H  +H  +K +KCEECGK F  + +L  HK IHT EK +KCEECG  F
Sbjct:  318 RKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAF 443

HSP 4 Score: 133.265 bits (334), Expect = 1.526e-35
Identity = 62/122 (50.82%), Postives = 84/122 (68.85%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCF 251
            +KC+ECGK F  + +L  H  IHT E+P+ C++CGK F  S  LT+H  +H+  KP+KCEECGK F  + +L +H ++HT +K +KCEECGK F  + +L  HK IHT EK +KCEECG  F
Sbjct:  406 YKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAF 527

HSP 5 Score: 131.724 bits (330), Expect = 6.324e-35
Identity = 61/124 (49.19%), Postives = 86/124 (69.35%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            +KC+ECG+AF  + +L  H  IHT E+P+ C++CGK F  S  LT+H  +H+  KP+KCEECGK F  + +L +H ++HT +K +KCEECGK F  + +L  HK IHT EK +KC ECG  F++
Sbjct:  266 YKCEECGEAFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQ 389

HSP 6 Score: 130.568 bits (327), Expect = 1.305e-34
Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 0

Query:  116 TRKNNLITKERGQSFKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCF 251
            TR   + T E+   +KC+ECGK+F  +  L  H  IHT E+P+ C++CGK F  S  LT+H I+H+  KP+KCE+CGK FK +  L  H ++HT +K +KCEECGK F  + +  +HK IHT  K +KCEECG  F
Sbjct:  478 TRHKRMHTGEK--PYKCEECGKSFSQSSTLTTHKIIHTGEKPYKCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGKAF 611

HSP 7 Score: 129.413 bits (324), Expect = 3.371e-34
Identity = 62/124 (50.00%), Postives = 83/124 (66.94%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            +KC+ECGKAF ++  L  H +IHT ++P+ C++CGK F  S  LT+H  +H+  KP+KCEECGK F  + +L  H  +HT +K +KC ECGK FK   +L  HK IH  EK +KCEECG  F R
Sbjct:  294 YKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNR 417

HSP 8 Score: 127.872 bits (320), Expect = 1.188e-33
Identity = 62/124 (50.00%), Postives = 84/124 (67.74%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            +KC ECGKAF+    L  H  IH  E+ + C++CGK F +S  LT H I+H+  KP+KCEECGK F  + +L KH ++HT +K +KCEECGK F  + +L +HK +HT EK +KCEECG  F +
Sbjct:  378 YKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKSFSQ 501

HSP 9 Score: 125.946 bits (315), Expect = 7.354e-33
Identity = 65/156 (41.67%), Postives = 91/156 (58.33%), Query Frame = 0

Query:  126 RGQSFKCKECGKAFEFNCDLKRHFRIHTCERP----------------------------FMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            R +S+KCKECGK F ++  L  H +I+T E+P                            + C++CG+ F +S  LT H I+H+  KP+KCEECGK F  + +L +H K+HT KK +KCEECGK F  + +L +HK +HT EK +KCEECG  F +
Sbjct:  206 REKSYKCKECGKTFNWSSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKCEECGEAFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTEHKKIHTRKKPYKCEECGKAFIWSSTLTRHKRMHTGEKPYKCEECGKAFSQ 361

HSP 10 Score: 125.561 bits (314), Expect = 7.646e-33
Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            +KC+ECGKAF ++  L +H  IHT E+P+ C+ CGK F QS  LT H  +H+  KP+KCEECGK+F  + +  KH  +HT  K +KCEECGK F  + +L +HK IHT E+ +K E+ G  F R
Sbjct:  518 YKCEECGKAFNWSSTLTKHKIIHTEEKPYKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGKAFFWSSTLTKHKRIHTGEQPYKWEKFGKAFNR 641

HSP 11 Score: 125.561 bits (314), Expect = 8.427e-33
Identity = 66/136 (48.53%), Postives = 86/136 (63.24%), Query Frame = 0

Query:  116 TRKNNLITKERGQSFKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCF 251
            TR   + T E+   +KC+ECGKAF  +  L  H  IHT E+ + C +CGK F Q   LT H I+H   K +KCEECGK F  + +L  H  +HT +K +KCEECGK F  + +L +HK IHT+EK +KCEECG  F
Sbjct:  338 TRHKRMHTGEK--PYKCEECGKAFSQSSTLTTHKIIHTGEKRYKCLECGKAFKQLSTLTTHKIIHVGEKLYKCEECGKGFNRSSNLTTHKIIHTGEKPYKCEECGKAFIWSSTLTKHKRIHTREKPYKCEECGKAF 471

HSP 12 Score: 103.99 bits (258), Expect = 2.376e-25
Identity = 48/110 (43.64%), Postives = 74/110 (67.27%), Query Frame = 0

Query:  130 FKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKE 239
            +KC++CGKAF+ +  L  H RIHT E+P+ C++CGK F +S   T+H ++H+ +KP+KCEECGK F  + +L KH ++HT ++ +K E+ GK F  +  L   K  H +E
Sbjct:  546 YKCEKCGKAFKQSSILTNHKRIHTGEKPYKCEECGKSFNRSSTFTKHKVIHTGVKPYKCEECGKAFFWSSTLTKHKRIHTGEQPYKWEKFGKAFNRSSHLTTDKITHWRE 655

HSP 13 Score: 94.7449 bits (234), Expect = 4.720e-22
Identity = 53/124 (42.74%), Postives = 74/124 (59.68%), Query Frame = 0

Query:  128 QSFKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCF 251
            +SFKCK+  K F       +H  I+  E+ + C++CGK F  S  LT H  +++  KP+KCEE  K+ K   +L  H  +H  +K +KCEECG+ F  + +L  HK IHT EK +KCEECG  F
Sbjct:  180 KSFKCKKRVKLFCMLSHKTQHKSIYHREKSYKCKECGKTFNWSSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKCEECGEAFNRSSNLTTHKIIHTGEKPYKCEECGKAF 303

HSP 14 Score: 79.337 bits (194), Expect = 7.176e-17
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 0

Query:  119 NNLITKERGQSFKCKECGKAFEFNCDLKRHFRIHTCERPFMCQDCGKCFAQSDGLTQHLIVHSSIKPFKCEECGKNFKTNGSLKKHIKLHTEKKSFKCEECGKCFKTNCSLKQHKTIHTKEKTFKCEECGNCFQR 253
            N   T  + + F+C +  K F    +  R    HT ++ F C+   K F      TQH  ++   K +KC+ECGK F  + +L  H K++TE+K +KCEE  K  K   +L  H+ IH  EK +KCEECG  F R
Sbjct:  143 NQCFTTAQSKVFQCDKYLKVFYKFLNSNRPKIRHTEKKSFKCKKRVKLFCMLSHKTQHKSIYHREKSYKCKECGKTFNWSSTLTNHRKIYTEEKPYKCEEYNKSPKQLSTLTTHEIIHAGEKLYKCEECGEAFNR 277

The following BLAST results are available for this feature:

BLAST of TCONS_00045327-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00045327-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ZN254	4.851e-41	54.69	Zinc finger protein 254 OS=Homo sapiens GN=ZNF254 ...	[more]

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TCONS_00045327-protein (polypeptide) - C. hemisphaerica