TCONS_00045147-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045147-protein
Unique NameTCONS_00045147-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length188

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045147-protein ID=TCONS_00045147-protein|Name=TCONS_00045147-protein|organism=Clytia hemisphaerica|type=polypeptide|length=188bp
LPCPENLVALDCEMVGVGKSKHDSLARCSIVDYHGNVLYDQYVQSRDQVT
DYRTPWSGIRPKDLENAVPFLMARRQILQTLKGKIIVGHALNFDMKILKI
RWPKDKIRDTSKFQPLRAKANLKDNNTPSLRRLTRELLFRDIQRSTHCSI
EDSIAAMDLYRIVENEWEKPTKSVYFDDLFWPKCLDNK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028730XLOC_028730Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045147TCONS_00045147Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 6..169
e-value: 3.5E-33
score: 126.2
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 8..160
e-value: 1.2E-11
score: 45.3
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 6..177
e-value: 1.2E-31
score: 109.5
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 6..166
NoneNo IPR availableCDDcd06144REX4_likecoord: 8..161
e-value: 1.94979E-75
score: 224.702

Blast
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BLAST of TCONS_00045147-protein vs. Swiss-Prot (Human)
Match: I20L2 (Interferon-stimulated 20 kDa exonuclease-like 2 OS=Homo sapiens GN=ISG20L2 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.744e-56
Identity = 91/169 (53.85%), Postives = 119/169 (70.41%), Query Frame = 0 
Query:    4 PENLVALDCEMVGVGKSKH-DSLARCSIVDYHGNVLYDQYVQSRDQVTDYRTPWSGIRPKDLENAVPFLMARRQILQTLKGKIIVGHALNFDMKILKIRWPKDKIRDTSKFQPLRAKANLKDNNTPSLRRLTRELLFRDIQ--RSTHCSIEDSIAAMDLYRIVENEWEK 169
            P  +VA+DCEMVG G   H  SLARCSIV+Y+G+VLYD+Y+     + DYRT WSGIR + + NA PF +AR QIL+ L GKI+VGHA++ D K L+   PK   RDTS   PL  KA+  +N T SL+ LT++LL RDIQ  +S H S+ED+ A M+LY++VE EWE+
Sbjct:  176 PRKMVAIDCEMVGTGPKGHVSSLARCSIVNYNGDVLYDEYILPPCHIVDYRTRWSGIRKQHMVNATPFKIARGQILKILTGKIVVGHAIHNDFKALQYFHPKSLTRDTSHIPPLNRKADCPENATMSLKHLTKKLLNRDIQVGKSGHSSVEDAQATMELYKLVEVEWEE 344
The following BLAST results are available for this feature:
BLAST of TCONS_00045147-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
I20L21.744e-5653.85Interferon-stimulated 20 kDa exonuclease-like 2 OS... [more]
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