TCONS_00045079-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045079-protein
Unique NameTCONS_00045079-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length171

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045079-protein ID=TCONS_00045079-protein|Name=TCONS_00045079-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
GTIEDTEMVDGLVLDHRISHFAEGVGRIEKAKIGLIQFCISPPKTDMENN
VIVSDYTQMDRVLREERQYILSICKQIKKSGCNVVLLQKSILRDAINDMG
LHFLGKMKIMVVRDIERNEVDFICKTLNCRPIASVDHLNPEMLGSADLVE
EFSTGAAKVVKVKLIVCRKFF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028662XLOC_028662Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045079TCONS_00045079Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027409GroEL-like_apical_dom
IPR002423Cpn60/TCP-1
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 3..169
e-value: 3.6E-39
score: 134.1
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 5..159
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 1..163
e-value: 7.7E-35
score: 120.4

Blast
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BLAST of TCONS_00045079-protein vs. Swiss-Prot (Human)
Match: TCPD (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4)

HSP 1 Score: 221.09 bits (562), Expect = 3.632e-70
Identity = 100/163 (61.35%), Postives = 136/163 (83.44%), Query Frame = 0 
Query:    1 GTIEDTEMVDGLVLDHRISHFAEGVGRIEKAKIGLIQFCISPPKTDMENNVIVSDYTQMDRVLREERQYILSICKQIKKSGCNVVLLQKSILRDAINDMGLHFLGKMKIMVVRDIERNEVDFICKTLNCRPIASVDHLNPEMLGSADLVEEFS-TGAAKVVKV 162
            GTI+D E+V+GLVL  ++S+   G+ R+EKAKIGLIQFC+S PKTDM+N ++VSDY QMDRVLREER YIL++ KQIKK+GCNV+L+QKSILRDA++D+ LHFL KMKIMV++DIER +++FICKT+  +P+A +D    +MLGSA+L EE +  G+ K++K+
Sbjct:  216 GTIDDCELVEGLVLTQKVSN--SGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKI 376
The following BLAST results are available for this feature:
BLAST of TCONS_00045079-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPD3.632e-7061.35T-complex protein 1 subunit delta OS=Homo sapiens ... [more]
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