TCONS_00044882-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044882-protein
Unique NameTCONS_00044882-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length116

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044882-protein ID=TCONS_00044882-protein|Name=TCONS_00044882-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp
LKELVPTNTKIELIDRLSATGLQTIEATSFVSPKWVPQLADNKELFTRIE
KKDGVSYPVLVPNLKGYQQAVASGVKEIAVFGSASEGFSQKNINCSIEES
LKRFQNVFDASKNDGI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028484XLOC_028484Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044882TCONS_00044882Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR000891PYR_CT
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..116
e-value: 3.1E-35
score: 121.3
IPR000891Pyruvate carboxyltransferasePFAMPF00682HMGL-likecoord: 5..113
e-value: 2.1E-9
score: 37.3
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 4..115

Blast
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BLAST of TCONS_00044882-protein vs. Swiss-Prot (Human)
Match: HMGCL (Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=Homo sapiens GN=HMGCL PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 8.070e-43
Identity = 65/115 (56.52%), Postives = 86/115 (74.78%), Query Frame = 0 
Query:    2 KELVPTNTKIELIDRLSATGLQTIEATSFVSPKWVPQLADNKELFTRIEKKDGVSYPVLVPNLKGYQQAVASGVKEIAVFGSASEGFSQKNINCSIEESLKRFQNVFDASKNDGI 116
            K +V T  KI+LID LS  GL  IE TSFVSPKWVPQ+ D+ E+   I+K  G++YPVL PNLKG++ AVA+G KE+ +FG+ASE F++KNINCSIEES +RF  +  A+++  I
Sbjct:   48 KNIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLTPNLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANI 162
The following BLAST results are available for this feature:
BLAST of TCONS_00044882-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HMGCL8.070e-4356.52Hydroxymethylglutaryl-CoA lyase, mitochondrial OS=... [more]
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