TCONS_00044747-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044747-protein
Unique NameTCONS_00044747-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length133

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044747-protein ID=TCONS_00044747-protein|Name=TCONS_00044747-protein|organism=Clytia hemisphaerica|type=polypeptide|length=133bp
MKTKAEIWVCKNLGCNKQFKHIQSLQNHKLNCGVSSSVKCPVCFKSLARS
WYLKNHKCKQKESLECSQCSKVFPKVWHLKRHIKNVHAKLKKELKCSTCE
RRSQDKTSMTNTNVVVVEIRTIMKILRRSKSTF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028359XLOC_028359Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044747TCONS_00044747Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 64..87
e-value: 9.2E-4
score: 28.5
coord: 8..30
e-value: 31.0
score: 9.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 66..87
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 64..92
score: 11.344
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 64..108
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 7..56
NoneNo IPR availableGENE3D3.30.160.60coord: 49..73
e-value: 2.4E-8
score: 33.7
NoneNo IPR availableGENE3D3.30.160.60coord: 26..48
e-value: 1.7E-4
score: 21.0
NoneNo IPR availableGENE3D3.30.160.60coord: 8..25
e-value: 0.029
score: 13.9
NoneNo IPR availablePFAMPF13894zf-C2H2_4coord: 65..87
e-value: 3.0E-4
score: 21.3
NoneNo IPR availableGENE3D2.40.155.10coord: 74..124
e-value: 5.3E-6
score: 26.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044747-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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