TCONS_00044664-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00044664-protein
Unique Name	TCONS_00044664-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	212

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00044664-protein ID=TCONS_00044664-protein|Name=TCONS_00044664-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
IVLHISDIVQGNVIEDEDKEYFLLLQKNFSGHDDLETLIKRSINKINTQQ
QGNEGIWLSLQKLHGDLQQVKDEHPLLVNHSTAIARKQGFPDVIMPGDIR
NDMYLTLVSGVFDKGRKTSLNMQVIVGVYDSNGKLLNEVISLGAGEPLVK
EYLSTINYHSEQPKWGETVKFVLPIDKVNGCHVRFSFKHRATLEGKTFFS
SFRYSFVVILPV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_028280	XLOC_028280	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00044664	TCONS_00044664	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027007	DHR-1_domain
IPR032376	DOCK_N

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027007	DHR-1 domain	PFAM	PF14429	DOCK-C2	coord: 96..207 e-value: 1.8E-28 score: 99.6
IPR027007	DHR-1 domain	PROSITE	PS51650	DHR_1	coord: 100..212 score: 28.013
IPR032376	Dedicator of cytokinesis, N-terminal domain	PFAM	PF16172	DOCK_N	coord: 2..91 e-value: 4.6E-14 score: 52.0

Blast

[Close]

BLAST of TCONS_00044664-protein vs. Swiss-Prot (Human)
Match: DOCK1 (Dedicator of cytokinesis protein 1 OS=Homo sapiens GN=DOCK1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.257e-55
Identity = 92/196 (46.94%), Postives = 137/196 (69.90%), Query Frame = 0

Query:    2 VLHISDIVQGNVIEDEDKEYFLLLQKNFSGHDDLETLIKRSINKINTQQQGNEGIWLSLQKLHGDLQQVKDEHPLLVNHSTAIARKQGFPDVIMPGDIRNDMYLTLVSGVFDKGRKTSL-NMQVIVGVYDSNGKLLNEVISLGAGEPLVKEYLSTINYHSEQPKWGETVKFVLPIDKVNGCHVRFSFKHRATLEGK 196
            V+ ++DI+ G V +DEDK++F+  Q     +D L+T+I + I       +G +G+W++L+ L GD+ Q++ E P LV+ +TA+ARK GFP++IMPGD+RND+Y+TLV G FDKG KT+  N++V V VYD +GK L  VI  GAG+  + EY S I Y  +QP+W ETVK  +PI+ VN  H+RF+F+HR++ + K
Sbjct:  329 VMDVTDIINGKV-DDEDKQHFIPFQPVAGENDFLQTVINKVIAAKEVNHKG-QGLWVTLKLLPGDIHQIRKEFPHLVDRTTAVARKTGFPEIIMPGDVRNDIYVTLVQGDFDKGSKTTAKNVEVTVSVYDEDGKRLEHVIFPGAGDEAISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSK 522

The following BLAST results are available for this feature:

BLAST of TCONS_00044664-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00044664-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DOCK1	1.257e-55	46.94	Dedicator of cytokinesis protein 1 OS=Homo sapiens...	[more]

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TCONS_00044664-protein (polypeptide) - C. hemisphaerica