TCONS_00044655-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044655-protein
Unique NameTCONS_00044655-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length207

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044655-protein ID=TCONS_00044655-protein|Name=TCONS_00044655-protein|organism=Clytia hemisphaerica|type=polypeptide|length=207bp
MPEEDAQYDEEMYHDSLSCKDKYSNCPTTLRQHCGSTVHTFVKTDWCRKT
CGDCSPDPAPAYVTAQPKISSSEMESIKATCLAAHNTKRRLHKNTPSMTY
DMDLAKRAQTYAEYLLEFDEWKHDPFRKYNGYESGVGENLYWSSSASRTS
TNAVVSWYNEINNYNFGTGKSNGGVIGHFTQLVWDSSTKLGCGVAKGTGG
TYVVSRY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028271XLOC_028271Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044655TCONS_00044655Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002413V5_allergen
IPR001283Allrgn_V5/Tpx1
IPR003582ShKT_dom
IPR014044CAP_domain
IPR018244Allrgn_V5/Tpx1_CS
IPR034113SCP_GAPR1-like
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005576 extracellular region
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002413Ves allergenPRINTSPR00838V5ALLERGENcoord: 98..116
score: 29.61
coord: 175..194
score: 46.88
coord: 151..166
score: 28.52
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-relatedPRINTSPR00837V5TPXLIKEcoord: 176..192
score: 53.68
coord: 153..166
score: 36.24
coord: 98..116
score: 31.91
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 18..55
e-value: 0.0034
score: 26.6
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 19..54
score: 9.448
IPR014044CAP domainSMARTSM00198SCP_3coord: 76..207
e-value: 1.8E-28
score: 110.6
IPR014044CAP domainPFAMPF00188CAPcoord: 82..204
e-value: 8.3E-21
score: 75.0
IPR014044CAP domainGENE3D3.40.33.10coord: 16..207
e-value: 4.9E-36
score: 124.0
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 75..207
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 177..187
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 81..207
e-value: 6.47886E-42
score: 138.882

Blast
[Close]
BLAST of TCONS_00044655-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.369e-16
Identity = 47/128 (36.72%), Postives = 63/128 (49.22%), Query Frame = 0 
Query:   81 CLAAHNTKRRLHKNTPSMTYDMDLAKRAQTYAEYLLEFDEWKHDPFRKYNGYESGVGENLYWSSSASRTSTNAVVSWYNEINNYNFGTGKSNGGVIGHFTQLVWDSSTKLGCGVAKGT-GGTYVVSRY 207
             L AHN  R+ H   P +    +L + AQ Y+E L      KH P           GENL W+S   +T       WY+EI NYNF       G  GHFT +VW ++ K+G G A  + G ++VV+RY
Sbjct:   13 VLKAHNEYRQKH-GVPPLKLCKNLNREAQQYSEALASTRILKHSP----ESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNFQQPGFTSGT-GHFTAMVWKNTKKMGVGKASASDGSSFVVARY 133
The following BLAST results are available for this feature:
BLAST of TCONS_00044655-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR16.369e-1636.72Golgi-associated plant pathogenesis-related protei... [more]
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