TCONS_00044540-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044540-protein
Unique NameTCONS_00044540-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044540-protein ID=TCONS_00044540-protein|Name=TCONS_00044540-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MVGKQNEICTETCIIVDHAAVFLEESGAKLELDTNPKNKNLLSFLSNISK
STWTCIVEGVIEYCRIIYDISTNYKVLVLCSNENSININDFEDQYQNIQQ
VLKGFGDLGPPNKETEANPSIYNGVDHAAKELIKISSESSIRSTKRIIVI
TSLEDESDARSISNVIWEIQNEHDKKGFCDIDLLVVNITLKGPEIIIPLK
EVSPHLHMAAITMEAEHCSKLIPLLTRKHYCLRSTIITGIPMKEEQHAGT
SANYDVEIIHSAAAHHEGDWLYTYQNSPNILEDANKSIVTLKWCTPKANS
LQG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_028162XLOC_028162Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044540TCONS_00044540Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019355Cell_cycle_regulator_Mat89Bb
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019355Cell cycle regulator Mat89BbPFAMPF10221DUF2151coord: 11..299
e-value: 2.4E-53
score: 181.6

Blast
[Close]
BLAST of TCONS_00044540-protein vs. Swiss-Prot (Human)
Match: INT13 (Integrator complex subunit 13 OS=Homo sapiens GN=INTS13 PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 8.662e-39
Identity = 105/323 (32.51%), Postives = 170/323 (52.63%), Query Frame = 0 
Query:   11 ETCIIVDHAAVFLEESGAKLELDTNPKNKNL-LSFLSNISKSTWTCIVEGVIEYCRIIYDISTNYKVL-VLCSNENSININDFEDQYQNIQQVLKGFGDLGPPNKETEANP---SIYNGVDHAAKELIKIS------------SESSIRSTKRIIVITSLEDESDARSISNVIWEIQNEHDKKG--------FCDIDLLVVNITLKGPEIIIP---LKEVSPHLHMAAITMEA-EHCSKLIPLLTRKHYCLRSTIITGIPMKEEQHAGTSANYDVEIIHSAAAHHEGDWLYTYQN--SPNILEDANKSIVTLKWCTPKANSLQ 302
            +T  +VDH     E     +E D   KN+   +  L+ ISKS WTC VE  +EYCRI+YDI    K++  + S+  +  +N +  + QN+Q+++     +GPPN    A+P   SI +G+  A + L KI+            +   + +  RII IT+ + +S  R + + + E  +EH+K              +L++++    G + ++     KE+SP L     ++ A  H +  + +L ++H+ L ST IT IPMKEEQHA TSANYDVE++H   AH   D+L +  +       E + K  +TLKWCTP+ N+++
Sbjct:    9 KTVFVVDHCPYMAESCRQHVEFDMLVKNRTQGIIPLAPISKSLWTCSVESSMEYCRIMYDIFPFKKLVNFIVSDSGAHVLNSWTQEDQNLQELMAALAAVGPPN--PRADPECCSILHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRIICITNAKSDSHVRMLEDCVQETIHEHNKLAANSDHLMQIQKCELVLIHTYPVGEDSLVSDRSKKELSPVLTSEVHSVRAGRHLATKLNILVQQHFDLASTTITNIPMKEEQHANTSANYDVELLHHKDAH--VDFLKSGDSHLGGGSREGSFKETITLKWCTPRTNNIE 327
The following BLAST results are available for this feature:
BLAST of TCONS_00044540-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
INT138.662e-3932.51Integrator complex subunit 13 OS=Homo sapiens GN=I... [more]
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