TCONS_00044356-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044356-protein
Unique NameTCONS_00044356-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044356-protein ID=TCONS_00044356-protein|Name=TCONS_00044356-protein|organism=Clytia hemisphaerica|type=polypeptide|length=153bp
ALKVFFFVLGALYVVYLIVLLIQAFQDLKNMPYFDVRLKFLTILMLLVVL
ISLVAVFLRFGSAVLEDNFVADVSTRYKNSVEFLAFYGLFNLYLYTMAYM
YTPLSSKGSGLKPVPSSFSIIADSDDENLPYREVKKKKLTNLDDFTSDDE
ING
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027989XLOC_027989Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044356TCONS_00044356Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF06664MIG-14_Wnt-bdcoord: 2..103
e-value: 5.2E-20
score: 71.7

Blast
[Close]
BLAST of TCONS_00044356-protein vs. Swiss-Prot (Human)
Match: TM181 (Transmembrane protein 181 OS=Homo sapiens GN=TMEM181 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 5.333e-39
Identity = 67/129 (51.94%), Postives = 101/129 (78.29%), Query Frame = 0 
Query:    1 ALKVFFFVLGALYVVYLIVLLIQAFQDLKNMPYFDVRLKFLTILMLLVVLISLVAVFLRFGSAVLEDNFVADVSTRYKNSVEFLAFYGLFNLYLYTMAYMYTPLSSK--GSGLKPVPSSFSIIADSDDE 127
             +KVFF V+ A+Y++YL+ L+++A  +L++MPY D+RLKFLT L  +V++IS+  ++LRFG+ VL+DNFVA++ST Y+NS EFL+FYGL N YLYT+A++Y+P  +    S LK  P +FS++ DSDD+
Sbjct:  456 GMKVFFMVVAAVYILYLLFLIVRACSELRHMPYVDLRLKFLTALTFVVLVISIAILYLRFGAQVLQDNFVAELSTHYQNSAEFLSFYGLLNFYLYTLAFVYSPSKNALYESQLKDNP-AFSMLNDSDDD 583
The following BLAST results are available for this feature:
BLAST of TCONS_00044356-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1815.333e-3951.94Transmembrane protein 181 OS=Homo sapiens GN=TMEM1... [more]
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