TCONS_00044144-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044144-protein
Unique NameTCONS_00044144-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044144-protein ID=TCONS_00044144-protein|Name=TCONS_00044144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
MPDIESLMQEWPPEFEEILKRTNLPSAELDCDLSEYVDVICSILDIPVYK
DRIQSLHVLFTLYSEFKNSQVSLFSLHLNWRFLINFLFFLATLYFAILSL
CIGGYRGRR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027791XLOC_027791Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044144TCONS_00044144Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022088Intraflagellar_transp_cmplxB
Vocabulary: Biological Process
TermDefinition
GO:0042073intraciliary transport
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042073 intraciliary transport
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022088Intraflagellar transport complex B protein 46PFAMPF12317IFT46_B_Ccoord: 1..70
e-value: 5.8E-32
score: 111.1

Blast
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BLAST of TCONS_00044144-protein vs. Swiss-Prot (Human)
Match: IFT46 (Intraflagellar transport protein 46 homolog OS=Homo sapiens GN=IFT46 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 4.484e-34
Identity = 52/70 (74.29%), Postives = 65/70 (92.86%), Query Frame = 0 
Query:    1 MPDIESLMQEWPPEFEEILKRTNLPSAELDCDLSEYVDVICSILDIPVYKDRIQSLHVLFTLYSEFKNSQ 70
            MPDI++LMQEW PEFEE+L + +LP+AE+DC L+EY+D+IC+ILDIPVYK RIQSLH+LF+LYSEFKNSQ
Sbjct:  204 MPDIDTLMQEWSPEFEELLGKVSLPTAEIDCSLAEYIDMICAILDIPVYKSRIQSLHLLFSLYSEFKNSQ 273
The following BLAST results are available for this feature:
BLAST of TCONS_00044144-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IFT464.484e-3474.29Intraflagellar transport protein 46 homolog OS=Hom... [more]
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