TCONS_00044050-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00044050-protein
Unique NameTCONS_00044050-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length334

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00044050-protein ID=TCONS_00044050-protein|Name=TCONS_00044050-protein|organism=Clytia hemisphaerica|type=polypeptide|length=334bp
MQCVNACEELLSKYTEAMLLTAFHQFIQSKEIDLSTLKEPTDQNKEILGT
LIKQFVQSYVIAETPDIAASAIIYDCKFCNKSYKRKSSLIAHLKKEHKGE
TKDESADPGEDHVVNYSKNALMLGYLVKNFADARRYGDGERILRLYKFFV
VLFKIDHRSKYGFYSLQLLAQINNLLPPDLAFELKWNRTVNNTGRYDGNV
ELDRELEHRNKYAKEELKHFQGKLTDQSIERVSRSYDKMREIVGKFDTEA
NVSNPSGKHTTPDWKADVLELAEQFQSSNLFQSDPNGRAHKRFPAFPKNV
FNGIDATSCKNWALDTVMNEFNNLNIYKHPFFKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027703XLOC_027703Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00044050TCONS_00044050Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 74..97
e-value: 0.0022
score: 27.2
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 76..97
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 74..102
score: 12.508
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 73..100
NoneNo IPR availableGENE3D3.30.160.60coord: 24..86
e-value: 1.1E-4
score: 21.7
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 87..136
e-value: 6.8E-4
score: 19.1

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044050-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top