TCONS_00043878-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043878-protein
Unique NameTCONS_00043878-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length338

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043878-protein ID=TCONS_00043878-protein|Name=TCONS_00043878-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
ITNPRARKGIVIRKGRCFICLGSDHLAKECSSSYACRKCKGRHHVSLCFA
NPGKKDEQKEKEKEDPEVEETVGSHIQTKGGILLQTAKASVCGEITSTDT
RLLFDTGSQRTYASEDVVQRLKLKTVRTERVMIKTFGSEEAKVKKLKVVR
FKVKRKVGKGYIDCEALCVPIVCSPIARQDVDYAGRNFEHLDGLTLADSN
EGHAEVEILIGSDFYHEFFTGKYKKGCSGPVASESCLGWVLSGPLGNKFG
TIQNCSLVETHLLRCLTEDCDRDTLKEDLKKFWEVDKVGEVGEDGCEEID
VVSKFEKEIYHDGKRYVSKLPFKPNHDELPDNFSDLRM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027548XLOC_027548Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043878TCONS_00043878Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008737Peptidase_asp_put
IPR001878Znf_CCHC
IPR021109Peptidase_aspartic_dom
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008737Peptidase aspartic, putativePFAMPF05585DUF1758coord: 97..248
e-value: 2.0E-16
score: 60.1
IPR001878Zinc finger, CCHC-typeGENE3D4.10.60.10coord: 5..48
e-value: 5.8E-4
score: 19.1
IPR021109Aspartic peptidase domainGENE3D2.40.70.10coord: 82..219
e-value: 1.1E-9
score: 38.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043878-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top