TCONS_00043622-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00043622-protein
Unique Name	TCONS_00043622-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	155

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00043622-protein ID=TCONS_00043622-protein|Name=TCONS_00043622-protein|organism=Clytia hemisphaerica|type=polypeptide|length=155bp
MKRGLTWRASIKRLQAKAEKARVKEEKEAKKAQLDARHEYLLGNISDALN
VDYNEIVEHIIEGTQIETITSFFRENGSRSSLIFFYQQMEATNDGVDHMR
LGHGGNQLVNKTKHKLFLTDGLAEKLTGFCLYFAKINKTKEITAQNIHNV
SKLDQ

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_027308	XLOC_027308	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00043622	TCONS_00043622	Clytia hemisphaerica	transcript

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 11..35

Blast

[Close]

BLAST of TCONS_00043622-protein vs. Swiss-Prot (Human)
Match: DYH5 (Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 2.890e-24
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = 0

Query:    7 WRASIKRLQAKAEKARVKEEKEAKKAQLDARHEYLLGNISDALNVDYNEIVEHIIEGTQIETITSFFRENGSRSSLIFFYQQMEATNDGVDHMRLGH-GGNQLVNK--TKHKLFLTDGLAEKLTGFCLYFAKINKTKEITAQNIH 148
            W+ S+ R+  +    R+K EKEAK+A LDARH YL   ++  L+++  E+ + I+EG QIE I   F   G R  L+F+YQ +E    G    +LG  GG  LV+    K K+F+T+G    LTG C++F + + +K IT  NIH
Sbjct:   10 WKHSVTRVLTQ----RLKGEKEAKRALLDARHNYLFAIVASCLDLNKTEVEDAILEGNQIERIDQLFAVGGLR-HLMFYYQDVEEAETG----QLGSLGGVNLVSGKIKKPKVFVTEGNDVALTGVCVFFIRTDPSKAITPDNIH 145

The following BLAST results are available for this feature:

BLAST of TCONS_00043622-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00043622-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
DYH5	2.890e-24	40.00	Dynein heavy chain 5, axonemal OS=Homo sapiens GN=...	[more]

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TCONS_00043622-protein (polypeptide) - C. hemisphaerica