TCONS_00043580-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043580-protein
Unique NameTCONS_00043580-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length312

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043580-protein ID=TCONS_00043580-protein|Name=TCONS_00043580-protein|organism=Clytia hemisphaerica|type=polypeptide|length=312bp
DCGTSCKAKEECVSFLYYRVQPPTCTLLDSPINRHSVRRNMSVDYYEIQN
KCSENTTICNFGTCYPHFGNDSYTCYCKGKSYGKNCERTNSAENPHVTCQ
EVKQLMPEAPSGMYWVGSVGAKNLLFCDMITDGGGWLRVGQINIRNSEEA
NAYNFNAIVKPFTSSIHNLSTSNYLLSGRRFEVLNQMARITQFRVYCRKV
TRGRTNHYTFDVSSHSGSNNKMFDHVLKNDEPPPNNLCGRIKFLPDDDSH
IQTFDCADLVPIIDYDDNKIRYRLYAGIKKPSSGRRTAGTTVLKCDENDS
NDKIGQWMFFIR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027267XLOC_027267Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043580TCONS_00043580Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014716Fibrinogen_a/b/g_C_1
IPR013032EGF-like_CS
IPR003609Pan_app
IPR000742EGF-like_dom
IPR002181Fibrinogen_a/b/g_C_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.10.25.10coord: 43..91
e-value: 0.0029
score: 16.9
IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1GENE3D3.90.215.10coord: 92..225
e-value: 2.4E-7
score: 30.3
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 75..86
IPR003609PAN/Apple domainPROSITEPS50948PANcoord: 1..52
score: 7.903
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 55..87
score: 8.832
IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainSUPERFAMILY56496Fibrinogen C-terminal domain-likecoord: 93..218

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043580-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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