TCONS_00043381-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043381-protein
Unique NameTCONS_00043381-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length109

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043381-protein ID=TCONS_00043381-protein|Name=TCONS_00043381-protein|organism=Clytia hemisphaerica|type=polypeptide|length=109bp
MRIMDAVLLLFRRSLLTVQADPAFPCPVPSWAESLKLMSSSTFLHNLMTF
DKDTINAEMVEFLEPYLTMPDYTLEGAKKSCGDVAGLLSWTRAMSFFYGV
NKEVLPLKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027086XLOC_027086Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043381TCONS_00043381Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024743Dynein_HC_stalk
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024743Dynein heavy chain, coiled coil stalkPFAMPF12777MTcoord: 31..106
e-value: 1.3E-6
score: 27.6

Blast
[Close]
BLAST of TCONS_00043381-protein vs. Swiss-Prot (Human)
Match: DYH5 (Dynein heavy chain 5, axonemal OS=Homo sapiens GN=DNAH5 PE=1 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 7.726e-42
Identity = 66/108 (61.11%), Postives = 81/108 (75.00%), Query Frame = 0 
Query:    1 MRIMDAVLLLFRRSLLTVQADPAFPCPVPSWAESLKLMSSSTFLHNLMTFDKDTINAEMVEFLEPYLTMPDYTLEGAKKSCGDVAGLLSWTRAMSFFYGVNKEVLPLK 108
            MRIMD VLLLF+R +  V+ D    C +PSW ESLKLM++  FL NL  F KDTIN E++EFL PY  MPDY +E AK+ CG+VAGL SWT+AM+ F+ +NKEVLPLK
Sbjct: 3320 MRIMDCVLLLFQRKVSAVKIDLEKSCTMPSWQESLKLMTAGNFLQNLQQFPKDTINEEVIEFLSPYFEMPDYNIETAKRVCGNVAGLCSWTKAMASFFSINKEVLPLK 3427
The following BLAST results are available for this feature:
BLAST of TCONS_00043381-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYH57.726e-4261.11Dynein heavy chain 5, axonemal OS=Homo sapiens GN=... [more]
back to top