TCONS_00043380-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043380-protein
Unique NameTCONS_00043380-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length128

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043380-protein ID=TCONS_00043380-protein|Name=TCONS_00043380-protein|organism=Clytia hemisphaerica|type=polypeptide|length=128bp
MNCNILRKVTLSTRMMSTVSKRLEGKVAIVTASTAGIGYAIAEGLAENGA
KVVISSRKETNVEEALQQLKSKDLEVSGCVCHVAKECDRTKLLEETLKQY
GKLDILVNNAGISPAFGPLLKVCPFQSF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_027085XLOC_027085Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043380TCONS_00043380Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR016040NAD(P)-bd_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 101..112
score: 67.98
coord: 27..44
score: 45.21
IPR002347Short-chain dehydrogenase/reductase SDRPFAMPF00106adh_shortcoord: 26..114
e-value: 1.5E-22
score: 79.9
NoneNo IPR availableGENE3D3.40.50.720coord: 11..124
e-value: 2.0E-26
score: 92.0
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 24..121

Blast
[Close]
BLAST of TCONS_00043380-protein vs. Swiss-Prot (Human)
Match: DHRS4 (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3)

HSP 1 Score: 110.538 bits (275), Expect = 9.693e-31
Identity = 57/114 (50.00%), Postives = 80/114 (70.18%), Query Frame = 0 
Query:   12 STRMMSTVSKR---LEGKVAIVTASTAGIGYAIAEGLAENGAKVVISSRKETNVEEALQQLKSKDLEVSGCVCHVAKECDRTKLLEETLKQYGKLDILVNNAGISPAFGPLLKV 122
            S RM S+   R   L  KVA+VTAST GIG+AIA  LA++GA VV+SSRK+ NV++A+  L+ + L V+G VCHV K  DR +L+   +K +G +DILV+NA ++P FG ++ V
Sbjct:   16 SVRMASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDV 129
The following BLAST results are available for this feature:
BLAST of TCONS_00043380-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DHRS49.693e-3150.00Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
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