TCONS_00043248-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00043248-protein
Unique NameTCONS_00043248-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length639

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00043248-protein ID=TCONS_00043248-protein|Name=TCONS_00043248-protein|organism=Clytia hemisphaerica|type=polypeptide|length=639bp
MSDSHLTLEKISIEEFRLYSLTALKSFLSIRKKSTTGSIDTLIARAFAAA
EENIPIDPELEHQERANTEEYTKKFTTLSVDDPFSIPHNEWLDEKDAIHK
WPKTYFMDISRYFSQVLGNDNLWQRLECEYKEGKAYRYYSDGFLGELQIT
FPKQNPNVCVMRCKCLPSQRVSMKQYDVWAIIQQKDTDNEIDGQILRGYC
TCTAGLLGSCNHVAGLLFRLEIANLLGETRKTCTSVRSKYMEPSSSKKKT
IKPGKLSSFVFRQDNYSKLAISKTKEDSKKILKRKLEYMPMSSSITNTQL
VSNPKKMRKMFFDSFKDVDPDSCFIQMMEGKPIIVNKEETQNSEILSLKE
HAKIFKDNNCYDHEKYLQAISLTDDQITKIYEKTVSQSNSKFWFEQRKGR
ITASNFKKIYTRMESLKTSDEDPIPLLKDVMGESSRRATWSMKHGISSER
HAIMRLKQVIRLKHRGIKFTNPGMTVSKEYPYISATPDLEFECPCCGKGV
CEVKCPTSVPLTRAPSWRTYGKHLENRNGSKLKTTSPYYFQIQGQMAVTN
RYFGYFFIFNIANRSFHLEKIDFSPSFWKEVLSNLKLFWNSFVFPRLLIT
TIPKSEPIVTDSENSNVNNSDMDIKMILAQESLNITFDK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026961XLOC_026961Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00043248TCONS_00043248Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011604Exonuc_phg/RecB_C
IPR019080YqaJ_viral_recombinase
IPR007527Znf_SWIM
IPR011335Restrct_endonuc-II-like
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
GO:0003677DNA binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0004518 nuclease activity
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011604Exonuclease, phage-type/RecB, C-terminalGENE3D3.90.320.10coord: 366..603
e-value: 6.0E-38
score: 129.8
IPR019080YqaJ viral recombinasePFAMPF09588YqaJcoord: 393..551
e-value: 3.7E-9
score: 36.8
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 176..221
score: 8.11
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 377..595

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043248-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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