TCONS_00042933-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042933-protein
Unique NameTCONS_00042933-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length444

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042933-protein ID=TCONS_00042933-protein|Name=TCONS_00042933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=444bp
MMAGNNEGCQIMVFTPSYEEFKDFSGYIRYMESKGAHKAGIAKVIPPKEW
QAVRRYNMKRIGEMEIKTPIQQTVSGQQGLFQLINIQKKTMQVKNLKELA
ETPKHKPPEGSIDELERKFWKNITFNPSIYGADVPGTIYDKDVKHWNINS
LNTILDTLNSDCSVKILGVNTAYLYFGMWKACFPWHTEDMDLYSINYLHH
GAPKFWYSIPPEHGKRLETLAKGFFSGSAQDCSEFMRHKMTLISPQILRK
FSIPVNKIVHNEGEFMVTFPYGYHAGFNLGFNIAESTNFASERWIEFGKK
AKHCQCNRDSVKINMDVFIKKFQPEEWKRIQQKRIEEKQANKKKHNNLSS
SSSDSSSQEEDSEEEDDEEDDDVSSDEEEKEEEIIDTETEEEIPLSSSEE
YSENLARVAKKQYRKPDSETRTRPKRLKLSKIDGDGKQYKSTFI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026699XLOC_026699Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042933TCONS_00042933Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom
IPR003349JmjN
IPR015943WD40/YVTN_repeat-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 328..348
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..444
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 74..312
IPR003347JmjC domainSMARTSM00558cupin_9coord: 140..306
e-value: 8.4E-57
score: 204.7
IPR003347JmjC domainPFAMPF02373JmjCcoord: 173..289
e-value: 4.4E-41
score: 139.8
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 140..306
score: 33.038
IPR003349JmjN domainSMARTSM00545JmjN_1coord: 10..52
e-value: 3.2E-16
score: 69.9
IPR003349JmjN domainPFAMPF02375JmjNcoord: 12..46
e-value: 1.8E-13
score: 50.1
IPR003349JmjN domainPROSITEPS51183JMJNcoord: 11..53
score: 14.506
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 65..421
e-value: 1.2E-5
score: 23.6

Blast
[Close]
BLAST of TCONS_00042933-protein vs. Swiss-Prot (Human)
Match: KDM4A (Lysine-specific demethylase 4A OS=Homo sapiens GN=KDM4A PE=1 SV=2)

HSP 1 Score: 442.195 bits (1136), Expect = 8.079e-146
Identity = 201/324 (62.04%), Postives = 245/324 (75.62%), Query Frame = 0 
Query:    6 NEGCQIMVFTPSYEEFKDFSGYIRYMESKGAHKAGIAKVIPPKEWQAVRRYNMKRIGEMEIKTPIQQTVSGQQGLFQLINIQKKTMQVKNLKELAETPKHKPPEGS-IDELERKFWKNITFNPSIYGADVPGTIYDKDVKHWNINSLNTILDTLNSDCSVKILGVNTAYLYFGMWKACFPWHTEDMDLYSINYLHHGAPKFWYSIPPEHGKRLETLAKGFFSGSAQDCSEFMRHKMTLISPQILRKFSIPVNKIVHNEGEFMVTFPYGYHAGFNLGFNIAESTNFASERWIEFGKKAKHCQCNRDSVKINMDVFIKKFQPEEWK 328
            N   +IM F P+ EEF++FS YI Y+ES+GAH+AG+AKV+PPKEW+    Y+   I ++ I  PIQQ V+GQ GLF   NIQKK M V+  +++A + K+  P  S  +ELERK+WKN+TFNP IYGADV GT+Y+K V  WNI  L TILD +  +  + I GVNT YLYFGMWK  F WHTEDMDLYSINYLH G PK WYS+PPEHGKRLE LAKGFF GSAQ C  F+RHKMTLISP +L+K+ IP +K+    GEFM+TFPYGYHAGFN GFN AESTNFA+ RWIE+GK+A  C C +D VKI+MDVF++KFQPE +K
Sbjct:    9 NPSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYD--DIDDLVIPAPIQQLVTGQSGLFTQYNIQKKAMTVREFRKIANSDKYCTPRYSEFEELERKYWKNLTFNPPIYGADVNGTLYEKHVDEWNIGRLRTILDLVEKESGITIEGVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLMLKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYK 330
The following BLAST results are available for this feature:
BLAST of TCONS_00042933-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDM4A8.079e-14662.04Lysine-specific demethylase 4A OS=Homo sapiens GN=... [more]
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