TCONS_00042845-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00042845-protein
Unique NameTCONS_00042845-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length116

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00042845-protein ID=TCONS_00042845-protein|Name=TCONS_00042845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=116bp
MATPEGGSTIFGKIIRREIPADIVYEDDQCLAFKDINPQAPVHVLVIPKK
PISQLSKAEDSDEQLLGHLLIAAKRVAKEMKIADDGFRIVINDGPNGGQE
VYHLHLHVLGGKQLEN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_026637XLOC_026637Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00042845TCONS_00042845Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001310Histidine_triad_HIT
IPR011146HIT-like
IPR019808Histidine_triad_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001310Histidine triad (HIT) proteinPRINTSPR00332HISTRIADcoord: 10..26
score: 63.29
coord: 31..49
score: 68.21
coord: 99..109
score: 65.82
IPR001310Histidine triad (HIT) proteinPFAMPF01230HITcoord: 16..113
e-value: 6.4E-33
score: 113.3
IPR011146HIT-like domainGENE3D3.30.428.10coord: 2..113
e-value: 4.1E-34
score: 117.4
IPR011146HIT-like domainPROSITEPS51084HIT_2coord: 10..116
score: 18.073
IPR011146HIT-like domainSUPERFAMILY54197HIT-likecoord: 7..113
IPR019808Histidine triad, conserved sitePROSITEPS00892HIT_1coord: 92..110
NoneNo IPR availableCDDcd01276PKCI_relatedcoord: 9..111
e-value: 5.19815E-61
score: 183.532

Blast
[Close]
BLAST of TCONS_00042845-protein vs. Swiss-Prot (Human)
Match: HINT1 (Histidine triad nucleotide-binding protein 1 OS=Homo sapiens GN=HINT1 PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 7.701e-50
Identity = 71/109 (65.14%), Postives = 91/109 (83.49%), Query Frame = 0 
Query:    6 GGSTIFGKIIRREIPADIVYEDDQCLAFKDINPQAPVHVLVIPKKPISQLSKAEDSDEQLLGHLLIAAKRVAKEMKIADDGFRIVINDGPNGGQEVYHLHLHVLGGKQL 114
            GG TIFGKIIR+EIPA I++EDD+CLAF DI+PQAP H LVIPKK ISQ+S AED DE LLGHL+I  K+ A ++ + + G+R+V+N+G +GGQ VYH+HLHVLGG+Q+
Sbjct:   14 GGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDDESLLGHLMIVGKKCAADLGL-NKGYRMVVNEGSDGGQSVYHVHLHVLGGRQM 121
The following BLAST results are available for this feature:
BLAST of TCONS_00042845-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HINT17.701e-5065.14Histidine triad nucleotide-binding protein 1 OS=Ho... [more]
back to top